Protein profile

VK055_1311

hypothetical protein

Genome: KpATCC43816

Gene: AIK79934.1 Structure source: Experimental + ColabFold UniProt A0A0H3GMY9
Export view
Amino acids 164
Annotations 1
Features 11
PDB binders 0
Druggability 0.865

Overview

Basic information about this protein and its source genome.

Accession
VK055_1311
Assembly
Klebsiella pneumoniae subsp. pneumoniae strain ATCC 43816 KPPR1, complete genome
Gene
AIK79934.1
Status
annotated
Amino acids
164
Structure source
Experimental + ColabFold
GO
GO:0046872 Binding to a metal ion.

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Human identity (%)
0.0
Gut microbiome off-target
hit
Essential (DEG)
Y
DEG identity (%)
88.344
DEG E-value
2.4900000000000003e-103
Localization
Cytoplasmic
ColabFold pLDDT
97.2

Selected Druggability evidence

PDB experimental structure

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.865
Structure 7TMV
Pocket Pocket 1
P2Rank
Structure 7TMV
Pocket No pockets
ColabFold model
FPocket 0.276 · Pocket 3
Core conservation Conserved core gene
Roary core
CoreCruncher core
Gut microbiome 59 / 4744 genomes with a hit
Normalized 0.012

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

1 GO

Gene Ontology (GO)

1

Sequence Features

Domain/signature hits from InterPro and related databases.

11 records
Show feature table
Start End DB Term Name
7 154 CDD cd07909 YciF
1 154 SUPERFAMILY SSF47240 Ferritin-like
1 154 InterPro IPR009078 Ferritin-like superfamily
75 95 Coils Coil Coil
6 163 Pfam PF05974 Domain of unknown function (DUF892)
6 163 InterPro IPR010287 Protein of unknown function DUF892, YciF-like
1 164 Gene3D G3DSA:1.20.1260.10 -
1 164 InterPro IPR012347 Ferritin-like
48 68 Coils Coil Coil
2 163 PANTHER PTHR30565 UNCHARACTERIZED
2 163 InterPro IPR047114 Protein YciF

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

Loading 3D structure...

Legend High Medium Low

Structural evidence

1 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
PDB 7TMV
X-ray 2.30 Å A,B
100.0% 1-164
PDBe RCSB PDBj File
Viewing
ColabFold VK055_1311
ColabFold — — full sequence — Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
2 0.789
3 0.695
4 0.258
1 0.238

Pockets (P2RANK)

Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).

P2RANK Sticks Spheres Surfaces Score Probability Labels Zoom Positions
1 6.81 0.349
2 6.17 0.307
3 4.07 0.163
4 3.04 0.1