Metabolic network

VK055_1560

serine--tRNA ligase

Network centrality 0.00508 top 88.9%
Chokepoint Yes

Attractive metabolic target: catalyzes a producing chokepoint reaction in Aminoacyl-tRNA biosynthesis, more central than 88.9% of genes in this genome.

Pathways

KEGG pathways this gene's reaction(s) belong to.

Network

Two-hop reaction neighborhood around this protein; pathway boxes use one primary KEGG route per reaction when several mappings exist. Click a pathway box to open its full route map.

Reaction catalyzed by this protein Chokepoint reaction Neighbor reaction Pathway grouping (2+ reactions sharing a route) Connected reaction (arrow shows direction, when known) ⇌ Reversible reaction (double arrow) Cross-pathway connection

Selected reaction

Click a node in the network above, or a row in the table below, to inspect it here.

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EC
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Pathway
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Genes
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Role
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Isoenzymes
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Catalyzed reactions

Every reaction this gene catalyzes, with substrates/products and isoenzyme backup.

RXN0-2161

EC 6.1.1.11 · RXN0-2161 · not reversible · no isoenzyme backup

a tRNAsec L-serine ATP
an L-seryl-[tRNAsec] diphosphate AMP

ENTF-RXN

EC - · ENTF-RXN · not reversible · 3 isoenzymes

Producing chokepoint
L-serine ATP H+
(L-seryl)adenylate diphosphate

Imported from KpATCC43816.sbml · 2026-07-09