Protein profile

VK055_2730

putative transposase protein

Genome: KpATCC43816

Gene: AIK81320.1 Structure source: ColabFold
Export view
Amino acids 58
Annotations 0
Features 3
PDB binders 0
Druggability 0.051

Overview

Basic information about this protein and its source genome.

Accession
VK055_2730
Assembly
Klebsiella pneumoniae subsp. pneumoniae strain ATCC 43816 KPPR1, complete genome
Gene
AIK81320.1
Status
annotated
Amino acids
58
Structure source
ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Human identity (%)
0.0
Gut microbiome off-target
hit
Essential (DEG)
Y
DEG identity (%)
47.368
DEG E-value
1.38e-08
Localization
Unknown
ColabFold pLDDT
92.76

Selected Druggability evidence

ColabFold / curated model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.051
Structure CB_VK055_2730
Pocket Pocket 3
P2Rank
Structure CB_VK055_2730
Pocket No pockets
ColabFold model
FPocket 0.051 · Pocket 3
Core conservation Accessory gene
Roary accessory
CoreCruncher accessory
Gut microbiome 9 / 4744 genomes with a hit
Normalized 0.002

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

No GO or EC annotations are currently loaded for this protein.

Sequence Features

Domain/signature hits from InterPro and related databases.

3 records
Show feature table
Start End DB Term Name
9 55 SUPERFAMILY SSF53098 Ribonuclease H-like
9 55 InterPro IPR012337 Ribonuclease H-like superfamily
2 58 PANTHER PTHR47515 LOW CALCIUM RESPONSE LOCUS PROTEIN T

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

No pockets are loaded yet for the displayed ColabFold model VK055_2730 structure. Run experimental pocket backfill to show FPocket/P2Rank overlays on this structure.

Loading 3D structure...

Legend High Medium Low

Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
ColabFold VK055_2730
ColabFold — — full sequence — Viewing