Protein profile

VK055_3028

hypothetical protein

Genome: KpATCC43816

Gene: AIK81613.1 Structure source: AlphaFold + ColabFold UniProt A0A0H3GHJ6
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Amino acids 138
Annotations 0
Features 13
PDB binders 0
Druggability 0.312

Overview

Basic information about this protein and its source genome.

Accession
VK055_3028
Assembly
Klebsiella pneumoniae subsp. pneumoniae strain ATCC 43816 KPPR1, complete genome
Gene
AIK81613.1
Status
annotated
Amino acids
138
Structure source
AlphaFold + ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Human identity (%)
0.0
Gut microbiome off-target
hit
Essential (DEG)
N
DEG identity (%)
0.0
Localization
Unknown
ColabFold pLDDT
97.31

Selected Druggability evidence

AlphaFold / UniProt model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.312
Structure A0A0H3GHJ6
Pocket Pocket 2
P2Rank 0.044
Structure A0A0H3GHJ6
Pocket Pocket 1
ColabFold model
FPocket 0.169 · Pocket 3
Core conservation Conserved core gene
Roary core
CoreCruncher core
Gut microbiome 262 / 4744 genomes with a hit
Normalized 0.055

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

No GO or EC annotations are currently loaded for this protein.

Sequence Features

Domain/signature hits from InterPro and related databases.

13 records
Show feature table
Start End DB Term Name
1 138 PIRSF PIRSF004681 UCP004681
1 138 InterPro IPR001602 UPF0047 protein YjbQ-like
1 138 SUPERFAMILY SSF111038 YjbQ-like
1 138 InterPro IPR035917 YjbQ-like superfamily
5 138 NCBIfam TIGR00149 secondary thiamine-phosphate synthase enzyme YjbQ
5 138 InterPro IPR001602 UPF0047 protein YjbQ-like
99 117 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature.
99 117 InterPro IPR001602 UPF0047 protein YjbQ-like
1 138 Gene3D G3DSA:2.60.120.460 -
2 137 PANTHER PTHR30615 UNCHARACTERIZED PROTEIN YJBQ-RELATED
2 137 InterPro IPR001602 UPF0047 protein YjbQ-like
19 134 Pfam PF01894 Uncharacterised protein family UPF0047
19 134 InterPro IPR001602 UPF0047 protein YjbQ-like

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

Loading 3D structure...

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Structural evidence

0 + 2

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold AF_A0A0H3GHJ6
AlphaFold — — full sequence — Viewing
ColabFold VK055_3028
ColabFold — — full sequence — Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
2 0.312
8 0.004
1 0.0
5 0.0

Pockets (P2RANK)

Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).

P2RANK Sticks Spheres Surfaces Score Probability Labels Zoom Positions
1 2.22 0.044