Protein profile

KP13_00684

Ferrous iron transport protein B

Genome: KpKP13

Gene: AHE42304.1 feoB Structure source: AlphaFold + ColabFold UniProt A6TF32
Amino acids 772
Annotations 4
Features 58
PDB binders 8
Druggability 0.993

Overview

Basic information about this protein and its source genome.

Accession
KP13_00684
Gene
AHE42304.1 feoB
Status
annotated
Amino acids
772
Structure source
AlphaFold + ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Human identity (%)
0.0
Gut microbiome off-target
hit
Essential (DEG)
N
DEG identity (%)
0.0
Localization
CytoplasmicMembrane
ColabFold pLDDT
82.6

Selected Druggability evidence

AlphaFold / UniProt model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.993
Structure A6TF32
Pocket Pocket 16
P2Rank 0.952
Structure A6TF32
Pocket Pocket 1
ColabFold model
FPocket 0.971 · Pocket 63
P2Rank 0.863 · Pocket 1
Core conservation Conserved core gene
Roary core
CoreCruncher core
Gut microbiome 112 / 4744 genomes with a hit
Normalized 0.024

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

4 GO

Gene Ontology (GO)

4
  • GO:0016020 A lipid bilayer along with all the proteins and protein complexes embedded in it and attached to it.
  • GO:0015093 Enables the transfer of ferrous iron (Fe(II) or Fe2+) ions from one side of a membrane to the other.
  • GO:0006826 The directed movement of iron (Fe) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
  • GO:0005525 Binding to GTP, guanosine triphosphate.

Sequence Features

Domain/signature hits from InterPro and related databases.

58 records
Show feature table
Start End DB Term Name
455 507 Pfam PF07664 Ferrous iron transport protein B C terminus
455 507 InterPro IPR011640 Ferrous iron transport protein B, C-terminal
743 772 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
511 529 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
27 45 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature
27 45 InterPro IPR006073 GTP binding domain
6 26 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature
6 26 InterPro IPR006073 GTP binding domain
179 259 Pfam PF17910 FeoB cytosolic helical domain
179 259 InterPro IPR041069 FeoB, cytosolic helical domain
723 742 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
415 425 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
277 299 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
686 691 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
309 331 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
530 663 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
691 713 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
282 306 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
448 452 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
365 393 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
386 408 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
175 274 Gene3D G3DSA:1.10.287.1770 -
429 447 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
312 331 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
1 174 Gene3D G3DSA:3.40.50.300 -
1 174 InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
1 719 PANTHER PTHR43185 FERROUS IRON TRANSPORT PROTEIN B
474 510 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
451 473 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
712 722 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
344 366 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
5 160 Pfam PF02421 Ferrous iron transport protein B
5 160 InterPro IPR030389 FeoB-type guanine nucleotide-binding (G) domain
394 414 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
307 311 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
510 532 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
332 342 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
664 685 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
4 167 SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
4 167 InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
723 742 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
3 175 FunFam G3DSA:3.40.50.300:FF:000426 Ferrous iron transport protein B
10 687 NCBIfam TIGR00437 ferrous iron transport protein B
10 687 InterPro IPR003373 Ferrous iron transport protein B
3 169 ProSiteProfiles PS51711 FeoB-type guanine nucleotide-binding (G) domain profile.
3 169 InterPro IPR030389 FeoB-type guanine nucleotide-binding (G) domain
1 281 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
453 473 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
692 711 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
662 684 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
343 364 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
353 443 Pfam PF07670 Nucleoside recognition
353 443 InterPro IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain
512 689 Pfam PF07670 Nucleoside recognition
512 689 InterPro IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain
8 165 CDD cd01879 FeoB
8 165 InterPro IPR030389 FeoB-type guanine nucleotide-binding (G) domain
426 447 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

0 + 2

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold AF_A6TF32
AlphaFold full sequence Viewing
ColabFold KP13_00684
ColabFold full sequence Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
16 0.993
38 0.882
6 0.845
2 0.796

Pockets (P2RANK)

Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).

P2RANK Sticks Spheres Surfaces Score Probability Labels Zoom Positions
1 34.15 0.949
2 5.53 0.264
3 4.76 0.21
4 4.09 0.164
5 3.83 0.149

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

58 records

Highest-confidence structural evidence: ligands co-crystallized with this exact protein. If the source PDB is loaded in TPW, use Open crystal to inspect it in the structure viewer.

Show only:
Ligand Source crystal MW · LogP · TPSA Lipinski PAINS SMILES
GNP 522.2 Da LogP -2.76 TPSA 301.9 3 viol. ✓ Clean c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O…

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.