Protein profile

KP13_02727

Galactose-proton symporter

Genome: KpKP13

Gene: galP AHE42705.1 Structure source: AlphaFold + ColabFold UniProt A0A0H3GVD3
Amino acids 464
Annotations 6
Features 65
PDB binders 4
Druggability 0.253

Overview

Basic information about this protein and its source genome.

Accession
KP13_02727
Gene
galP AHE42705.1
Status
annotated
Amino acids
464
Structure source
AlphaFold + ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
hit
Human identity (%)
37.624
Human E-value
1.09e-12
Gut microbiome off-target
hit
Essential (DEG)
N
DEG identity (%)
0.0
Localization
CytoplasmicMembrane
ColabFold pLDDT
90.51

Selected Druggability evidence

AlphaFold / UniProt model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.253
Structure A0A0H3GVD3
Pocket Pocket 20
P2Rank 0.954
Structure A0A0H3GVD3
Pocket Pocket 1
ColabFold model
FPocket 0.904 · Pocket 10
P2Rank 0.979 · Pocket 1
Core conservation Conserved core gene
Roary core
CoreCruncher core
Gut microbiome 110 / 4744 genomes with a hit
Normalized 0.023

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

6 GO

Gene Ontology (GO)

6
  • GO:0016020 A lipid bilayer along with all the proteins and protein complexes embedded in it and attached to it.
  • GO:0022857 Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other.
  • GO:0055085 The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.
  • GO:0005886 The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
  • GO:0015149 Enables the transfer of a hexose sugar, a monosaccharide with 6 carbon atoms, from one side of a membrane to the other.
  • GO:0015293 Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy.

Sequence Features

Domain/signature hits from InterPro and related databases.

65 records
Show feature table
Start End DB Term Name
21 43 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
13 448 SUPERFAMILY SSF103473 MFS general substrate transporter
13 448 InterPro IPR036259 MFS transporter superfamily
104 108 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
193 250 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
7 447 NCBIfam TIGR00879 sugar porter family MFS transporter
7 447 InterPro IPR003663 Sugar/inositol transporter
109 130 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
252 274 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
161 171 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
407 417 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
18 450 Pfam PF00083 Sugar (and other) transporter
18 450 InterPro IPR005828 Major facilitator, sugar transporter-like
108 130 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
374 384 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
58 77 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
169 191 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
211 231 Coils Coil Coil
1 15 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
8 453 Gene3D G3DSA:1.20.1250.20 MFS general substrate transporter like domains
8 453 InterPro IPR036259 MFS transporter superfamily
290 311 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
131 141 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
16 44 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
84 103 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
45 55 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
21 438 CDD cd17315 MFS_GLUT_like
307 323 ProSitePatterns PS00216 Sugar transport proteins signature 1.
307 323 InterPro IPR005829 Sugar transporter, conserved site
172 192 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
18 440 ProSiteProfiles PS50850 Major facilitator superfamily (MFS) profile.
18 440 InterPro IPR020846 Major facilitator superfamily domain
343 347 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
417 436 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
348 373 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
418 436 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
114 139 ProSitePatterns PS00217 Sugar transport proteins signature 2.
114 139 InterPro IPR005829 Sugar transporter, conserved site
84 103 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
320 342 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
56 77 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
142 160 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
142 159 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
5 452 PANTHER PTHR48020 PROTON MYO-INOSITOL COTRANSPORTER
251 274 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
385 406 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
289 311 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
275 289 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
385 407 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
26 36 PRINTS PR00171 Sugar transporter signature
26 36 InterPro IPR003663 Sugar/inositol transporter
262 272 PRINTS PR00171 Sugar transporter signature
262 272 InterPro IPR003663 Sugar/inositol transporter
352 373 PRINTS PR00171 Sugar transporter signature
352 373 InterPro IPR003663 Sugar/inositol transporter
375 387 PRINTS PR00171 Sugar transporter signature
375 387 InterPro IPR003663 Sugar/inositol transporter
109 128 PRINTS PR00171 Sugar transporter signature
109 128 InterPro IPR003663 Sugar/inositol transporter
8 453 FunFam G3DSA:1.20.1250.20:FF:000008 Galactose-proton symporter (Galactose transporter)
318 340 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
78 83 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
312 319 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
350 372 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
437 464 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

0 + 2

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold AF_A0A0H3GVD3
AlphaFold full sequence Viewing
ColabFold KP13_02727
ColabFold full sequence Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
20 0.253

Pockets (P2RANK)

Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).

P2RANK Sticks Spheres Surfaces Score Probability Labels Zoom Positions
1 31.89 0.941
2 1.93 0.04
3 1.6 0.025
4 1.07 0.007
5 0.75 0.002

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

154 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
37X P11169 568.7 Da LogP -0.45 TPSA 198.8 3 viol. ✓ Clean CCCCCCC(CCCCCC)(CO[C@@H]1[C@H]([C@@H]([C@H]([C@…
F00 P11169 332.4 Da LogP 1.11 TPSA 99.4 ✓ Ro5 ✓ Clean C=CCCCCCCCCCO[C@H]1[C@@H]([C@H](O[C@@H]([C@@H]1…
OLC P11169 356.5 Da LogP 4.92 TPSA 66.8 ✓ Ro5 ✓ Clean CCCCCCCC\C=C/CCCCCCCC(=O)OC[C@@H](CO)O
Y01 P11169 486.7 Da LogP 7.80 TPSA 63.6 1 viol. ✓ Clean CC(C)CCC[C@@H](C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3…

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.