Protein profile

KP13_02161

Fructose-bisphosphate aldolase class 2

Genome: KpKP13

Gene: fbaA AHE42733.1 Structure source: AlphaFold + ColabFold UniProt A0A0H3GV85
Amino acids 359
Annotations 8
Features 20
PDB binders 8
Druggability 0.48

Overview

Basic information about this protein and its source genome.

Accession
KP13_02161
Gene
fbaA AHE42733.1
Status
annotated
Amino acids
359
Structure source
AlphaFold + ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Human identity (%)
0.0
Gut microbiome off-target
hit
Essential (DEG)
Y
DEG identity (%)
95.543
DEG E-value
0.0
Localization
Cytoplasmic
ColabFold pLDDT
95.49

Selected Druggability evidence

AlphaFold / UniProt model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.48
Structure A0A0H3GV85
Pocket Pocket 1
P2Rank 0.256
Structure A0A0H3GV85
Pocket Pocket 1
ColabFold model
FPocket 0.497 · Pocket 2
P2Rank 0.264 · Pocket 1
Core conservation Conserved core gene
Roary core
CoreCruncher core
Gut microbiome 201 / 4744 genomes with a hit
Normalized 0.042

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

1 EC 7 GO

Enzyme Commission (EC)

1

Gene Ontology (GO)

7
  • GO:0008270 Binding to a zinc ion (Zn).
  • GO:0005975 The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y.
  • GO:0016832 Catalysis of the cleavage of a C-C bond in a molecule containing a hydroxyl group and a carbonyl group to form two smaller molecules, each being an aldehyde or a ketone.
  • GO:0004332 Catalysis of the reaction: beta-D-fructose 1,6-bisphosphate = D-glyceraldehyde 3-phosphate + dihydroxyacetone phosphate.
  • GO:0006096 The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.
  • GO:0005829 The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
  • GO:0006094 The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol.

Sequence Features

Domain/signature hits from InterPro and related databases.

20 records
Show feature table
Start End DB Term Name
17 355 Pfam PF01116 Fructose-bisphosphate aldolase class-II
17 355 InterPro IPR000771 Fructose-bisphosphate aldolase, class-II
101 112 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1.
101 112 InterPro IPR000771 Fructose-bisphosphate aldolase, class-II
3 358 PANTHER PTHR30559 FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS 2
3 358 InterPro IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype
2 359 FunFam G3DSA:3.20.20.70:FF:000013 Class II fructose-bisphosphate aldolase
14 357 NCBIfam TIGR00167 ketose-bisphosphate aldolase
14 357 InterPro IPR000771 Fructose-bisphosphate aldolase, class-II
4 358 NCBIfam TIGR01520 class II fructose-bisphosphate aldolase
4 358 InterPro IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype
4 357 SUPERFAMILY SSF51569 Aldolase
2 359 Gene3D G3DSA:3.20.20.70 Aldolase class I
2 359 InterPro IPR013785 Aldolase-type TIM barrel
15 359 CDD cd00946 FBP_aldolase_IIA
15 359 InterPro IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype
13 359 PIRSF PIRSF001359 F_bP_aldolase_II
13 359 InterPro IPR000771 Fructose-bisphosphate aldolase, class-II
172 183 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2.
172 183 InterPro IPR000771 Fructose-bisphosphate aldolase, class-II

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

Loading 3D structure...

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Structural evidence

0 + 2

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold AF_A0A0H3GV85
AlphaFold full sequence Viewing
ColabFold KP13_02161
ColabFold full sequence Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
1 0.48

Pockets (P2RANK)

Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).

P2RANK Sticks Spheres Surfaces Score Probability Labels Zoom Positions
1 3.92 0.155
2 2.95 0.095
3 2.22 0.054
4 1.86 0.036
5 1.78 0.033

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

120 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
13P P0AB71 170.1 Da LogP -1.34 TPSA 104.1 ✓ Ro5 ✓ Clean C(C(=O)COP(=O)(O)O)O
2FP P9WQA3 340.1 Da LogP -3.14 TPSA 211.3 1 viol. ✓ Clean C([C@H]([C@@H]([C@H](C(=O)COP(=O)(O)O)O)O)O)OP(…
8HC P9WQA3 189.2 Da LogP 1.64 TPSA 70.4 ✓ Ro5 ✓ Clean c1cc2ccc(nc2c(c1)O)C(=O)O
FLC W8TRN9 189.1 Da LogP -5.25 TPSA 140.6 ✓ Ro5 ✓ Clean C(C(=O)[O-])C(CC(=O)[O-])(C(=O)[O-])O
G3P P9WQA3 172.1 Da LogP -1.55 TPSA 107.2 ✓ Ro5 ✓ Clean C([C@H](COP(=O)(O)O)O)O
GOS P0AB71 342.1 Da LogP -3.35 TPSA 214.4 1 viol. ✓ Clean C([C@H]([C@H]([C@@H]([C@H](COP(=O)(O)O)O)O)O)O)…
MLT Q6TV43 134.1 Da LogP -1.09 TPSA 94.8 ✓ Ro5 ✓ Clean C([C@H](C(=O)O)O)C(=O)O
NH4 P0AB71 18.0 Da LogP 0.38 TPSA 36.5 ✓ Ro5 ✓ Clean [NH4+]

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.