Protein profile

KP13_02367

putative metabolite transport protein

Genome: KpKP13

Gene: AHE42938.1 Structure source: AlphaFold + ColabFold UniProt A0A0H3GUI6
Amino acids 473
Annotations 5
Features 47
PDB binders 0
Druggability 0.976

Overview

Basic information about this protein and its source genome.

Accession
KP13_02367
Gene
AHE42938.1
Status
annotated
Amino acids
473
Structure source
AlphaFold + ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
hit
Human identity (%)
30.476
Human E-value
5.18e-09
Gut microbiome off-target
hit
Essential (DEG)
Y
DEG identity (%)
69.915
DEG E-value
0.0
Localization
CytoplasmicMembrane
ColabFold pLDDT
85.38

Selected Druggability evidence

AlphaFold / UniProt model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.976
Structure A0A0H3GUI6
Pocket Pocket 28
P2Rank 0.935
Structure A0A0H3GUI6
Pocket Pocket 1
ColabFold model
FPocket 0.837 · Pocket 25
P2Rank 0.984 · Pocket 1
Core conservation Conserved core gene
Roary core
CoreCruncher core
Gut microbiome 32 / 4744 genomes with a hit
Normalized 0.007

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

5 GO

Gene Ontology (GO)

5
  • GO:0016020 A lipid bilayer along with all the proteins and protein complexes embedded in it and attached to it.
  • GO:0022857 Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other.
  • GO:0055085 The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.
  • GO:0005886 The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
  • GO:0046943 Enables the transfer of carboxylic acids from one side of a membrane to the other. Carboxylic acids are organic acids containing one or more carboxyl (COOH) groups or anions (COO-).

Sequence Features

Domain/signature hits from InterPro and related databases.

47 records
Show feature table
Start End DB Term Name
27 473 Gene3D G3DSA:1.20.1250.20 MFS general substrate transporter like domains
27 473 InterPro IPR036259 MFS transporter superfamily
63 457 Pfam PF00083 Sugar (and other) transporter
63 457 InterPro IPR005828 Major facilitator, sugar transporter-like
125 129 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
394 413 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
40 459 CDD cd17316 MFS_SV2_like
412 434 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
1 38 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
320 339 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
132 154 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
194 198 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
39 61 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
346 365 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
71 93 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
130 152 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
199 218 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
301 319 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
371 393 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
167 189 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
33 466 SUPERFAMILY SSF103473 MFS general substrate transporter
33 466 InterPro IPR036259 MFS transporter superfamily
414 435 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
100 122 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
219 279 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
439 458 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
460 473 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
97 102 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
103 124 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
173 193 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
320 339 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
62 72 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
39 61 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
73 96 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
280 300 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
340 345 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
369 391 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
436 440 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
33 466 PANTHER PTHR23508 CARBOXYLIC ACID TRANSPORTER PROTEIN HOMOLOG
366 370 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
199 218 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
39 464 ProSiteProfiles PS50850 Major facilitator superfamily (MFS) profile.
39 464 InterPro IPR020846 Major facilitator superfamily domain
441 459 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
346 365 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
153 172 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
283 305 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

0 + 2

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold AF_A0A0H3GUI6
AlphaFold full sequence Viewing
ColabFold KP13_02367
ColabFold full sequence Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
28 0.976
24 0.247

Pockets (P2RANK)

Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).

P2RANK Sticks Spheres Surfaces Score Probability Labels Zoom Positions
1 25.06 0.903
2 10.37 0.557
3 5.13 0.236
4 3.71 0.142
5 2.28 0.057

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

86 records

Bioactivity inferred from similar proteins in ChEMBL. Score = pchembl (−log Ki/IC₅₀; higher = more potent).

Show only:
Ligand UniProt (homolog) pchembl MW · LogP · TPSA Lipinski PAINS SMILES
CHEMBL1146 Q4U2R8 7.52 462.5 Da LogP -0.23 TPSA 150.5 ✓ Ro5 ✓ Clean Cn1nnnc1SCC1=C(C(=O)O)N2C(=O)[C@@H](NC(=O)[C@H]…
CHEMBL376503 Q8VC69 7.05 647.9 Da LogP 7.02 TPSA 87.7 2 viol. ✓ Clean O=C(O)c1ccccc1-c1c2cc(Br)c(=O)c(Br)c-2oc2c(Br)c…
CHEMBL1435 Q4U2R8 6.75 454.5 Da LogP -0.64 TPSA 156.1 1 viol. ✓ Clean Cc1nnc(SCC2=C(C(=O)O)N3C(=O)[C@@H](NC(=O)Cn4cnn…
CHEMBL507674 Q4U2R8 6.68 645.7 Da LogP -1.11 TPSA 220.3 2 viol. ✓ Clean CCN1CCN(C(=O)N[C@@H](C(=O)N[C@@H]2C(=O)N3C(C(=O…
CLS Q4U2R8 6.66 396.4 Da LogP 0.59 TPSA 113.0 ✓ Ro5 ✓ Clean CC(=O)OCC1=C(N2[C@@H]([C@@H](C2=O)NC(=O)Cc3cccs…
CHEMBL161 Q4U2R8 6.64 554.6 Da LogP -1.20 TPSA 215.2 2 viol. ✓ Clean CO/N=C(\C(=O)N[C@@H]1C(=O)N2C(C(=O)O)=C(CSc3nc(…
REF Q4U2R8 6.57 302.2 Da LogP 1.31 TPSA 141.3 ✓ Ro5 Alert c1c2c-3c(c(c1O)O)OC(=O)c4c3c(c(c(c4)O)O)OC2=O
CHEMBL2075007 O35956 6.40 267.4 Da LogP 1.60 TPSA 55.4 ✓ Ro5 ✓ Clean COC(=O)[C@@H](CSCc1ccccc1)NC(C)=O
0L1 Q8VC69 6.39 146.1 Da LogP 0.72 TPSA 74.6 ✓ Ro5 ✓ Clean C(CCC(=O)O)CC(=O)O
CHEMBL571 O35956 6.30 254.3 Da LogP 3.11 TPSA 54.4 ✓ Ro5 ✓ Clean CC(C(=O)O)c1cccc(C(=O)c2ccccc2)c1
CHEMBL316157 Q4U2R8 6.13 415.5 Da LogP -0.32 TPSA 93.4 ✓ Ro5 ✓ Clean O=C(Cc1cccs1)N[C@@H]1C(=O)N2C(C(=O)[O-])=C(C[n+…
1FL Q4U2R8 6.07 250.2 Da LogP 3.04 TPSA 57.5 ✓ Ro5 ✓ Clean c1cc(c(cc1c2ccc(cc2F)F)C(=O)O)O
7BA Q4U2R8 316.4 Da LogP 3.60 TPSA 57.2 ✓ Ro5 ✓ Clean COc1ccc(cc1O)/C=C\c2cc(c(c(c2)OC)OC)OC
AIC O88909 349.4 Da LogP 0.32 TPSA 112.7 ✓ Ro5 ✓ Clean CC1([C@@H](N2[C@H](S1)[C@@H](C2=O)NC(=O)[C@@H](…
CFX O88909 427.5 Da LogP 0.10 TPSA 148.3 ✓ Ro5 ✓ Clean CO[C@@]1([C@@H]2N(C1=O)C(=C(CS2)COC(=O)N)C(=O)O…
CHEMBL1201195 Q8VC69 471.5 Da LogP -0.73 TPSA 163.3 1 viol. ✓ Clean CO[C@@]1(NC(=O)CSCC#N)C(=O)N2C(C(=O)O)=C(CSc3nn…
CHEMBL1214 Q8VC69 378.4 Da LogP 0.49 TPSA 124.0 ✓ Ro5 ✓ Clean CC1(C)S[C@@H]2[C@H](NC(=O)C(C(=O)O)c3ccccc3)C(=…
CHEMBL1443 O88909 414.5 Da LogP 2.48 TPSA 95.9 ✓ Ro5 ✓ Clean CCOc1ccc2ccccc2c1C(=O)N[C@@H]1C(=O)N2[C@@H]1SC(…
CHEMBL1537 O88909 461.5 Da LogP 0.09 TPSA 148.1 ✓ Ro5 ✓ Clean CC1(C)S[C@@H]2[C@H](NC(=O)[C@H](NC(=O)N3CCNC3=O…
CHEMBL172513 O76082 161.2 Da LogP -1.81 TPSA 60.4 ✓ Ro5 ✓ Clean C[N+](C)(C)CC(O)CC(=O)[O-]
CHEMBL1956820 Q4U2R8 957.5 Da LogP 9.55 TPSA 181.3 3 viol. ✓ Clean COc1ccc2c(O[C@@H]3C[C@H]4C(=O)N[C@]5(P(=O)(O)Cc…
CHEMBL222913 O88909 523.6 Da LogP 0.98 TPSA 177.4 2 viol. ✓ Clean CO/N=C(\C(=O)N[C@@H]1C(=O)N2C(C(=O)O)=C(CSC(=O)…
CHEMBL4077758 O76082 534.5 Da LogP -1.61 TPSA 180.1 2 viol. ✓ Clean C[N+](C)(C)CC(CC(=O)[O-])OC(=O)CCCCC(=O)Nc1ccn(…
CHEMBL4085610 O76082 590.6 Da LogP -0.05 TPSA 180.1 2 viol. ✓ Clean C[N+](C)(C)CC(CC(=O)[O-])OC(=O)CCCCCCCCC(=O)Nc1…
CHEMBL4095790 O76082 506.5 Da LogP -2.39 TPSA 180.1 2 viol. ✓ Clean C[N+](C)(C)CC(CC(=O)[O-])OC(=O)CCC(=O)Nc1ccn([C…
CHEMBL4103546 O76082 562.6 Da LogP -0.83 TPSA 180.1 2 viol. ✓ Clean C[N+](C)(C)CC(CC(=O)[O-])OC(=O)CCCCCCC(=O)Nc1cc…
CHEMBL41194 Q4U2R8 426.5 Da LogP 4.64 TPSA 89.3 ✓ Ro5 ✓ Clean CCCc1nc2c(n1Cc1ccc(-c3ccccc3-c3nnn[nH]3)cc1)C(=…
CHEMBL575 O88909 380.4 Da LogP 0.95 TPSA 105.2 ✓ Ro5 ✓ Clean COc1cccc(OC)c1C(=O)N[C@@H]1C(=O)N2[C@@H]1SC(C)(…
CHEMBL819 O88909 401.4 Da LogP 1.90 TPSA 112.7 ✓ Ro5 ✓ Clean Cc1onc(-c2ccccc2)c1C(=O)N[C@@H]1C(=O)N2[C@@H]1S…
CHEMBL891 O88909 435.9 Da LogP 2.55 TPSA 112.7 ✓ Ro5 ✓ Clean Cc1onc(-c2ccccc2Cl)c1C(=O)N[C@@H]1C(=O)N2[C@@H]…
CHEMBL893 Q8VC69 470.3 Da LogP 3.20 TPSA 112.7 ✓ Ro5 ✓ Clean Cc1onc(-c2c(Cl)cccc2Cl)c1C(=O)N[C@@H]1C(=O)N2[C…
CHEMBL897 Q4U2R8 285.4 Da LogP 2.20 TPSA 74.7 ✓ Ro5 ✓ Clean CCCN(CCC)S(=O)(=O)c1ccc(C(=O)O)cc1
PNN O88909 334.4 Da LogP 0.86 TPSA 86.7 ✓ Ro5 ✓ Clean CC1([C@@H](N2[C@H](S1)[C@@H](C2=O)NC(=O)Cc3cccc…
PNV O88909 350.4 Da LogP 0.70 TPSA 95.9 ✓ Ro5 ✓ Clean CC1([C@@H](N2[C@H](S1)[C@@H](C2=O)NC(=O)COc3ccc…
TAZ O88909 300.3 Da LogP -1.52 TPSA 122.5 ✓ Ro5 ✓ Clean C[C@@]1([C@@H](N2[C@H](S1(=O)=O)CC2=O)C(=O)O)Cn…
WPP O88909 517.6 Da LogP -0.24 TPSA 156.4 1 viol. ✓ Clean CCN1CCN(C(=O)C1=O)C(=O)N[C@H](c2ccccc2)C(=O)N[C…

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.