Protein profile

KP13_00838

Stationary phase-inducible protein CsiE

Genome: KpKP13

Gene: AHE43202.1 csiE Structure source: AlphaFold + ColabFold UniProt A0A0H3GTR2
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Amino acids 425
Annotations 1
Features 8
PDB binders 0
Druggability 0.282

Overview

Basic information about this protein and its source genome.

Accession
KP13_00838
Assembly
Klebsiella pneumoniae subsp. pneumoniae Kp13, complete sequence
Gene
AHE43202.1 csiE
Status
annotated
Amino acids
425
Structure source
AlphaFold + ColabFold
GO
GO:0006355 Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Human identity (%)
0.0
Gut microbiome off-target
hit
Essential (DEG)
N
DEG identity (%)
0.0
Localization
Cytoplasmic
ColabFold pLDDT
89.63

Selected Druggability evidence

AlphaFold / UniProt model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.282
Structure A0A0H3GTR2
Pocket Pocket 7
P2Rank 0.791
Structure A0A0H3GTR2
Pocket Pocket 1
ColabFold model
FPocket 0.621 · Pocket 31
P2Rank 0.678 · Pocket 1
Core conservation Conserved core gene
Roary core
CoreCruncher core
Gut microbiome 67 / 4744 genomes with a hit
Normalized 0.014

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

1 GO

Gene Ontology (GO)

1
  • GO:0006355 Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.

Sequence Features

Domain/signature hits from InterPro and related databases.

8 records
Show feature table
Start End DB Term Name
11 424 PANTHER PTHR30185 CRYPTIC BETA-GLUCOSIDE BGL OPERON ANTITERMINATOR
234 332 SUPERFAMILY SSF63520 PTS-regulatory domain, PRD
234 332 InterPro IPR036634 PRD domain superfamily
229 336 ProSiteProfiles PS51372 PRD domain profile.
229 336 InterPro IPR011608 PRD domain
235 329 Gene3D G3DSA:1.10.1790.10 PRD domain
241 328 Pfam PF00874 PRD domain
241 328 InterPro IPR011608 PRD domain

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

Loading 3D structure...

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Structural evidence

0 + 2

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold AF_A0A0H3GTR2
AlphaFold — — full sequence — Viewing
ColabFold KP13_00838
ColabFold — — full sequence — Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
7 0.282

Pockets (P2RANK)

Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).

P2RANK Sticks Spheres Surfaces Score Probability Labels Zoom Positions
1 12.43 0.65
2 1.33 0.015