Protein profile

KP13_00842

Inositol-1-monophosphatase

Genome: KpKP13

Gene: suhB AHE43206.1 Structure source: AlphaFold + ColabFold UniProt A0A0H3H1J3
Amino acids 267
Annotations 10
Features 34
PDB binders 4
Druggability 0.463

Overview

Basic information about this protein and its source genome.

Accession
KP13_00842
Gene
suhB AHE43206.1
Status
annotated
Amino acids
267
Structure source
AlphaFold + ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
hit
Human identity (%)
44.118
Human E-value
1.44e-13
Gut microbiome off-target
hit
Essential (DEG)
Y
DEG identity (%)
89.139
DEG E-value
0.0
Localization
Cytoplasmic
ColabFold pLDDT
94.69

Selected Druggability evidence

AlphaFold / UniProt model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.463
Structure A0A0H3H1J3
Pocket Pocket 5
P2Rank 0.896
Structure A0A0H3H1J3
Pocket Pocket 1
ColabFold model
FPocket 0.661 · Pocket 3
P2Rank 0.889 · Pocket 1
Core conservation Conserved core gene
Roary core
CoreCruncher core
Gut microbiome 172 / 4744 genomes with a hit
Normalized 0.036

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

1 EC 9 GO

Enzyme Commission (EC)

1

Gene Ontology (GO)

9
  • GO:0046854 The chemical reactions and pathways resulting in the formation of phosphatidylinositol phosphate.
  • GO:0008934 Catalysis of the reaction: 1D-myo-inositol 1-phosphate + H2O = myo-inositol + phosphate.
  • GO:0005737 The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
  • GO:0046872 Binding to a metal ion.
  • GO:0003723 Binding to an RNA molecule or a portion thereof.
  • GO:0006020 The chemical reactions and pathways involving inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms.
  • GO:0042254 A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.
  • GO:0007165 The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
  • GO:0031564 A positive regulation of gene expression mechanism that allows RNA polymerase to continue transcription beyond a termination site, thus allowing expression of downstream genes under specific conditions.

Sequence Features

Domain/signature hits from InterPro and related databases.

34 records
Show feature table
Start End DB Term Name
4 246 CDD cd01639 IMPase
4 246 InterPro IPR033942 Inositol monophosphatase
1 140 FunFam G3DSA:3.30.540.10:FF:000003 Inositol-1-monophosphatase
2 260 Pfam PF00459 Inositol monophosphatase family
2 260 InterPro IPR000760 Inositol monophosphatase-like
81 94 ProSitePatterns PS00629 Inositol monophosphatase family signature 1.
81 94 InterPro IPR020583 Inositol monophosphatase, metal-binding site
211 225 ProSitePatterns PS00630 Inositol monophosphatase family signature 2.
211 225 InterPro IPR020550 Inositol monophosphatase, conserved site
1 140 Gene3D G3DSA:3.30.540.10 -
156 182 PRINTS PR01959 SuhB family inositol monophosphatase signature
156 182 InterPro IPR022337 Inositol monophosphatase SuhB-like
17 39 PRINTS PR01959 SuhB family inositol monophosphatase signature
17 39 InterPro IPR022337 Inositol monophosphatase SuhB-like
104 123 PRINTS PR01959 SuhB family inositol monophosphatase signature
104 123 InterPro IPR022337 Inositol monophosphatase SuhB-like
198 210 PRINTS PR01959 SuhB family inositol monophosphatase signature
198 210 InterPro IPR022337 Inositol monophosphatase SuhB-like
1 259 SUPERFAMILY SSF56655 Carbohydrate phosphatase
3 260 PANTHER PTHR20854 INOSITOL MONOPHOSPHATASE
141 267 Gene3D G3DSA:3.40.190.80 -
38 58 PRINTS PR00377 Inositol monophosphatase superfamily signature
38 58 InterPro IPR000760 Inositol monophosphatase-like
130 153 PRINTS PR00377 Inositol monophosphatase superfamily signature
130 153 InterPro IPR000760 Inositol monophosphatase-like
81 97 PRINTS PR00377 Inositol monophosphatase superfamily signature
81 97 InterPro IPR000760 Inositol monophosphatase-like
208 232 PRINTS PR00377 Inositol monophosphatase superfamily signature
208 232 InterPro IPR000760 Inositol monophosphatase-like
177 198 PRINTS PR00377 Inositol monophosphatase superfamily signature
177 198 InterPro IPR000760 Inositol monophosphatase-like
60 76 PRINTS PR00377 Inositol monophosphatase superfamily signature
60 76 InterPro IPR000760 Inositol monophosphatase-like
141 267 FunFam G3DSA:3.40.190.80:FF:000004 Inositol-1-monophosphatase

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

Loading 3D structure...

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Structural evidence

0 + 2

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold AF_A0A0H3H1J3
AlphaFold full sequence Viewing
ColabFold KP13_00842
ColabFold full sequence Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
5 0.463
10 0.284

Pockets (P2RANK)

Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).

P2RANK Sticks Spheres Surfaces Score Probability Labels Zoom Positions
1 17.66 0.806

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

154 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
IPD P29218 258.1 Da LogP -4.98 TPSA 173.6 ✓ Ro5 ✓ Clean [C@H]1([C@H](C([C@@H]([C@@H](C1O)O)O)OP(=O)([O-…
LIP P29218 258.1 Da LogP -4.98 TPSA 173.6 ✓ Ro5 ✓ Clean [C@H]1([C@@H](C([C@H]([C@@H](C1O)O)O)OP(=O)([O-…
PE4 P0ADG4 354.4 Da LogP 0.11 TPSA 84.8 ✓ Ro5 ✓ Clean CCOCCOCCOCCOCCOCCOCCOCCO
SRT O33832 150.1 Da LogP -2.12 TPSA 115.1 ✓ Ro5 ✓ Clean [C@H]([C@H](C(=O)O)O)(C(=O)O)O

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.