Protein profile

KP13_03754

putative manganese transport protein mntH

Genome: KpKP13

Gene: AHE43373.1 mntH Structure source: AlphaFold + ColabFold UniProt A0A0H3GTA3
Amino acids 392
Annotations 9
Features 50
PDB binders 3
Druggability 0.985

Overview

Basic information about this protein and its source genome.

Accession
KP13_03754
Gene
AHE43373.1 mntH
Status
annotated
Amino acids
392
Structure source
AlphaFold + ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
hit
Human identity (%)
46.377
Human E-value
4.91e-17
Gut microbiome off-target
hit
Essential (DEG)
Y
DEG identity (%)
41.514
DEG E-value
4.15e-89
Localization
CytoplasmicMembrane
ColabFold pLDDT
82.17

Selected Druggability evidence

AlphaFold / UniProt model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.985
Structure A0A0H3GTA3
Pocket Pocket 2
P2Rank 0.846
Structure A0A0H3GTA3
Pocket Pocket 1
ColabFold model
FPocket 0.715 · Pocket 22
P2Rank 0.394 · Pocket 1
Core conservation Conserved core gene
Roary core
CoreCruncher core
Gut microbiome 129 / 4744 genomes with a hit
Normalized 0.027

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

9 GO

Gene Ontology (GO)

9
  • GO:0030001 The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
  • GO:0046873 Enables the transfer of metal ions from one side of a membrane to the other.
  • GO:0016020 A lipid bilayer along with all the proteins and protein complexes embedded in it and attached to it.
  • GO:0005886 The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
  • GO:0015086 Enables the transfer of cadmium (Cd) ions from one side of a membrane to the other.
  • GO:0005384 Enables the transfer of manganese (Mn) ions from one side of a membrane to the other.
  • GO:0046872 Binding to a metal ion.
  • GO:0015293 Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy.
  • GO:0034755 A process in which an iron ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.

Sequence Features

Domain/signature hits from InterPro and related databases.

50 records
Show feature table
Start End DB Term Name
262 292 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
328 349 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
327 349 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
125 135 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
218 240 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
1 356 NCBIfam TIGR01197 metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family
1 356 InterPro IPR001046 NRAMP family
74 97 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
216 242 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
17 362 Pfam PF01566 Natural resistance-associated macrophage protein
17 362 InterPro IPR001046 NRAMP family
278 297 PRINTS PR00447 Natural resistance-associated macrophage protein signature
278 297 InterPro IPR001046 NRAMP family
129 150 PRINTS PR00447 Natural resistance-associated macrophage protein signature
129 150 InterPro IPR001046 NRAMP family
179 202 PRINTS PR00447 Natural resistance-associated macrophage protein signature
179 202 InterPro IPR001046 NRAMP family
104 123 PRINTS PR00447 Natural resistance-associated macrophage protein signature
104 123 InterPro IPR001046 NRAMP family
76 102 PRINTS PR00447 Natural resistance-associated macrophage protein signature
76 102 InterPro IPR001046 NRAMP family
2 355 NCBIfam NF037982 Nramp family divalent metal transporter
243 261 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
260 282 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
98 102 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
136 155 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
293 303 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
1 30 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
175 197 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
31 54 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
196 215 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
103 124 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
33 55 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
303 322 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
392 392 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
350 369 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
156 174 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
304 322 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
1 389 PANTHER PTHR11706 SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER
1 389 InterPro IPR001046 NRAMP family
102 124 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
323 327 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
175 195 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
369 391 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
1 388 Hamap MF_00221 Divalent metal cation transporter MntH [mntH].
1 388 InterPro IPR001046 NRAMP family
55 73 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
75 97 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
370 391 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
136 155 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

0 + 2

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold AF_A0A0H3GTA3
AlphaFold full sequence Viewing
ColabFold KP13_03754
ColabFold full sequence Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
2 0.985
32 0.444

Pockets (P2RANK)

Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).

P2RANK Sticks Spheres Surfaces Score Probability Labels Zoom Positions
1 12.67 0.658
2 11.74 0.623
3 3.62 0.136
4 2.47 0.068
5 1.87 0.037

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

85 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
DMU E4KPW4 482.6 Da LogP -1.23 TPSA 178.5 2 viol. ✓ Clean CCCCCCCCCCO[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)C…
NJZ E4KPW4 333.3 Da LogP 2.70 TPSA 99.7 ✓ Ro5 ✓ Clean [H]/N=C(\SCc1cc(cc(c1)CS/C(=N/[H])/N)Br)/N
OLC Q9RTP8 356.5 Da LogP 4.92 TPSA 66.8 ✓ Ro5 ✓ Clean CCCCCCCC\C=C/CCCCCCCC(=O)OC[C@@H](CO)O

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.