Protein profile

KP13_31955

putative glutathione peroxidase

Genome: KpKP13

Gene: AHE45082.1 Structure source: AlphaFold + ColabFold UniProt A0A0H3GRS6
Amino acids 170
Annotations 2
Features 26
PDB binders 3
Druggability 0.389

Overview

Basic information about this protein and its source genome.

Accession
KP13_31955
Gene
AHE45082.1
Status
annotated
Amino acids
170
Structure source
AlphaFold + ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
hit
Human identity (%)
53.947
Human E-value
4.11e-18
Gut microbiome off-target
hit
Essential (DEG)
Y
DEG identity (%)
44.586
DEG E-value
2.8400000000000003e-44
Localization
Cytoplasmic
ColabFold pLDDT
93.49

Selected Druggability evidence

AlphaFold / UniProt model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.389
Structure A0A0H3GRS6
Pocket Pocket 1
P2Rank 0.078
Structure A0A0H3GRS6
Pocket Pocket 1
ColabFold model
FPocket 0.397 · Pocket 4
Core conservation Accessory gene
Roary core
CoreCruncher accessory
Gut microbiome 300 / 4744 genomes with a hit
Normalized 0.063

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

2 GO

Gene Ontology (GO)

2
  • GO:0004602 Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O.
  • GO:0006979 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.

Sequence Features

Domain/signature hits from InterPro and related databases.

26 records
Show feature table
Start End DB Term Name
6 169 ProSiteProfiles PS51352 Thioredoxin domain profile.
6 169 InterPro IPR013766 Thioredoxin domain
12 168 SUPERFAMILY SSF52833 Thioredoxin-like
12 168 InterPro IPR036249 Thioredoxin-like superfamily
11 165 PANTHER PTHR11592 GLUTATHIONE PEROXIDASE
11 165 InterPro IPR000889 Glutathione peroxidase
14 164 CDD cd00340 GSH_Peroxidase
14 164 InterPro IPR000889 Glutathione peroxidase
1 170 PIRSF PIRSF000303 Glutathion_perox
1 170 InterPro IPR000889 Glutathione peroxidase
70 77 ProSitePatterns PS00763 Glutathione peroxidases signature 2.
70 77 InterPro IPR029760 Glutathione peroxidase conserved site
4 170 ProSiteProfiles PS51355 Glutathione peroxidase profile.
4 170 InterPro IPR000889 Glutathione peroxidase
9 170 FunFam G3DSA:3.40.30.10:FF:000010 Glutathione peroxidase
14 121 Pfam PF00255 Glutathione peroxidase
14 121 InterPro IPR000889 Glutathione peroxidase
32 49 PRINTS PR01011 Glutathione peroxidase family signature
32 49 InterPro IPR000889 Glutathione peroxidase
67 83 PRINTS PR01011 Glutathione peroxidase family signature
67 83 InterPro IPR000889 Glutathione peroxidase
132 141 PRINTS PR01011 Glutathione peroxidase family signature
132 141 InterPro IPR000889 Glutathione peroxidase
34 49 ProSitePatterns PS00460 Glutathione peroxidases active site.
34 49 InterPro IPR029759 Glutathione peroxidase active site
6 170 Gene3D G3DSA:3.40.30.10 Glutaredoxin

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

0 + 2

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold AF_A0A0H3GRS6
AlphaFold full sequence Viewing
ColabFold KP13_31955
ColabFold full sequence Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
1 0.389

Pockets (P2RANK)

Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).

P2RANK Sticks Spheres Surfaces Score Probability Labels Zoom Positions
1 1.45 0.02

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

106 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
G9N P36969 477.4 Da LogP 5.08 TPSA 58.6 1 viol. ✓ Clean COc1ccc(cc1Cl)N([C@H](c2cccs2)C(=O)NCCc3ccccc3)…
NH4 Q8T8E2 18.0 Da LogP 0.38 TPSA 36.5 ✓ Ro5 ✓ Clean [NH4+]
POP Q00277 176.0 Da LogP -2.08 TPSA 129.9 ✓ Ro5 ✓ Clean O[P@@](=O)([O-])O[P@@](=O)(O)[O-]

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.