Protein profile

KP13_04953

chaperone TorD family protein

Genome: KpKP13

Gene: AHE45315.1 Structure source: AlphaFold + ColabFold UniProt A0A0H3GR03
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Amino acids 184
Annotations 0
Features 8
PDB binders 0
Druggability 0.557

Overview

Basic information about this protein and its source genome.

Accession
KP13_04953
Assembly
Klebsiella pneumoniae subsp. pneumoniae Kp13, complete sequence
Gene
AHE45315.1
Status
annotated
Amino acids
184
Structure source
AlphaFold + ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Human identity (%)
0.0
Gut microbiome off-target
hit
Essential (DEG)
N
DEG identity (%)
0.0
Localization
CytoplasmicMembrane
ColabFold pLDDT
95.25

Selected Druggability evidence

AlphaFold / UniProt model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.557
Structure A0A0H3GR03
Pocket Pocket 8
P2Rank 0.203
Structure A0A0H3GR03
Pocket Pocket 1
ColabFold model
FPocket 0.035 · Pocket 1
P2Rank 0.302 · Pocket 1
Core conservation Conserved core gene
Roary core
CoreCruncher core
Gut microbiome 102 / 4744 genomes with a hit
Normalized 0.022

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

No GO or EC annotations are currently loaded for this protein.

Sequence Features

Domain/signature hits from InterPro and related databases.

8 records
Show feature table
Start End DB Term Name
2 180 SUPERFAMILY SSF89155 TorD-like
2 180 InterPro IPR036411 TorD-like superfamily
2 181 PANTHER PTHR34227 CHAPERONE PROTEIN YCDY
1 184 PIRSF PIRSF004690 DmsD
1 184 InterPro IPR026269 Tat proofreading chaperone DmsD-type
1 183 Gene3D G3DSA:1.10.3480.10 -
36 146 Pfam PF02613 Nitrate reductase delta subunit
36 146 InterPro IPR020945 DMSO/Nitrate reductase chaperone

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

Loading 3D structure...

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Structural evidence

0 + 2

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold AF_A0A0H3GR03
AlphaFold — — full sequence — Viewing
ColabFold KP13_04953
ColabFold — — full sequence — Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
8 0.557
2 0.161
4 0.022
1 0.003

Pockets (P2RANK)

Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).

P2RANK Sticks Spheres Surfaces Score Probability Labels Zoom Positions
1 5.27 0.203
2 3.2 0.088