Protein profile

KP13_04276

Soluble aldose sugar dehydrogenase

Genome: KpKP13

Gene: AHE45510.1 Structure source: AlphaFold + ColabFold UniProt A0A0H3GQN4
Amino acids 369
Annotations 0
Features 14
PDB binders 1
Druggability 0.484

Overview

Basic information about this protein and its source genome.

Accession
KP13_04276
Gene
AHE45510.1
Status
annotated
Amino acids
369
Structure source
AlphaFold + ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
hit
Human identity (%)
28.5
Human E-value
6.55e-14
Gut microbiome off-target
hit
Essential (DEG)
N
DEG identity (%)
0.0
Localization
CytoplasmicMembrane
ColabFold pLDDT
95.23

Selected Druggability evidence

AlphaFold / UniProt model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.484
Structure A0A0H3GQN4
Pocket Pocket 15
P2Rank 0.565
Structure A0A0H3GQN4
Pocket Pocket 1
ColabFold model
FPocket 0.171 · Pocket 1
P2Rank 0.501 · Pocket 1
Core conservation Conserved core gene
Roary core
CoreCruncher core
Gut microbiome 89 / 4744 genomes with a hit
Normalized 0.019

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

No GO or EC annotations are currently loaded for this protein.

Sequence Features

Domain/signature hits from InterPro and related databases.

14 records
Show feature table
Start End DB Term Name
1 21 Phobius SIGNAL_PEPTIDE Signal peptide region
1 21 SignalP_GRAM_NEGATIVE SignalP-noTM SignalP-noTM
1 21 SignalP_GRAM_POSITIVE SignalP-TM SignalP-TM
22 359 PANTHER PTHR19328 HEDGEHOG-INTERACTING PROTEIN
16 21 Phobius SIGNAL_PEPTIDE_C_REGION C-terminal region of a signal peptide.
32 364 Pfam PF07995 Glucose / Sorbosone dehydrogenase
32 364 InterPro IPR012938 Glucose/Sorbosone dehydrogenase
22 368 SUPERFAMILY SSF50952 Soluble quinoprotein glucose dehydrogenase
22 368 InterPro IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase
17 368 Gene3D G3DSA:2.120.10.30 -
17 368 InterPro IPR011042 Six-bladed beta-propeller, TolB-like
1 3 Phobius SIGNAL_PEPTIDE_N_REGION N-terminal region of a signal peptide.
22 369 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
4 15 Phobius SIGNAL_PEPTIDE_H_REGION Hydrophobic region of a signal peptide.

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

0 + 2

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold AF_A0A0H3GQN4
AlphaFold full sequence Viewing
ColabFold KP13_04276
ColabFold full sequence Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
15 0.484
2 0.007
25 0.001
1 0.0

Pockets (P2RANK)

Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).

P2RANK Sticks Spheres Surfaces Score Probability Labels Zoom Positions
1 12.4 0.565
2 5.59 0.222
3 3.1 0.084
4 3.09 0.083
5 2.42 0.053

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

1 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
HDN P13650 44.1 Da LogP 0.65 TPSA 36.2 ✓ Ro5 Alert CN=N

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.