Protein profile

KP13_31514

putative aldehyde/histidinol dehydrogenase

Genome: KpKP13

Gene: AHE45864.1 Structure source: AlphaFold + ColabFold UniProt A0A0H3GPI3
Amino acids 494
Annotations 2
Features 15
PDB binders 8
Druggability 0.947

Overview

Basic information about this protein and its source genome.

Accession
KP13_31514
Gene
AHE45864.1
Status
annotated
Amino acids
494
Structure source
AlphaFold + ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
hit
Human identity (%)
42.453
Human E-value
1.53e-48
Gut microbiome off-target
hit
Essential (DEG)
Y
DEG identity (%)
45.328
DEG E-value
2.21e-134
Localization
Cytoplasmic
ColabFold pLDDT
97.06

Selected Druggability evidence

AlphaFold / UniProt model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.947
Structure A0A0H3GPI3
Pocket Pocket 6
P2Rank 0.896
Structure A0A0H3GPI3
Pocket Pocket 1
ColabFold model
FPocket 0.53 · Pocket 2
P2Rank 0.872 · Pocket 1
Core conservation Conserved core gene
Roary core
CoreCruncher core
Gut microbiome 16 / 4744 genomes with a hit
Normalized 0.003

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

2 GO

Gene Ontology (GO)

2
  • GO:0016491 Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
  • GO:0016620 Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.

Sequence Features

Domain/signature hits from InterPro and related databases.

15 records
Show feature table
Start End DB Term Name
20 493 PANTHER PTHR11699 ALDEHYDE DEHYDROGENASE-RELATED
10 494 SUPERFAMILY SSF53720 ALDH-like
10 494 InterPro IPR016161 Aldehyde/histidinol dehydrogenase
82 102 Coils Coil Coil
266 273 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site.
266 273 InterPro IPR029510 Aldehyde dehydrogenase, glutamic acid active site
272 461 Gene3D G3DSA:3.40.309.10 Aldehyde Dehydrogenase; Chain A, domain 2
272 461 InterPro IPR016163 Aldehyde dehydrogenase, C-terminal
32 490 Gene3D G3DSA:3.40.605.10 Aldehyde Dehydrogenase; Chain A, domain 1
32 490 InterPro IPR016162 Aldehyde dehydrogenase, N-terminal
294 305 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site.
294 305 InterPro IPR016160 Aldehyde dehydrogenase, cysteine active site
22 274 FunFam G3DSA:3.40.605.10:FF:000007 NAD/NADP-dependent betaine aldehyde dehydrogenase
33 490 Pfam PF00171 Aldehyde dehydrogenase family
33 490 InterPro IPR015590 Aldehyde dehydrogenase domain

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

Loading 3D structure...

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Structural evidence

0 + 2

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold AF_A0A0H3GPI3
AlphaFold full sequence Viewing
ColabFold KP13_31514
ColabFold full sequence Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
6 0.947

Pockets (P2RANK)

Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).

P2RANK Sticks Spheres Surfaces Score Probability Labels Zoom Positions
1 15.67 0.759
2 12.22 0.643
3 6.74 0.344

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

158 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
6ZU P00352 344.4 Da LogP 3.03 TPSA 73.6 ✓ Ro5 ✓ Clean CC1=C(C(=O)Oc2c1ccc(c2)OS(=O)(=O)C)Cc3ccccc3
6ZW P00352 231.3 Da LogP 2.95 TPSA 33.5 ✓ Ro5 ✓ Clean CCN(CC)c1ccc2c(c1)OC(=O)C=C2C
6ZY P00352 367.4 Da LogP 4.41 TPSA 63.7 ✓ Ro5 ✓ Clean Cc1c(oc2c1cc3c(c2)OC(=O)C(=C3C)CCC(=O)N4CCCCC4)C
K9P P00352 297.4 Da LogP 4.58 TPSA 40.5 ✓ Ro5 ✓ Clean CCCCCC(=O)N1C[C@H](c2c1cc(c3c2cccc3)O)C
N98 P47895 373.4 Da LogP 3.58 TPSA 75.0 ✓ Ro5 ✓ Clean COC(=O)c1cc(nc2n1nc(c2)c3ccccc3)c4ccc5c(c4)OCO5
NW8 P47895 304.8 Da LogP 5.32 TPSA 17.3 1 viol. ✓ Clean c1ccc(cc1)c2cn3cccc(c3n2)c4ccc(cc4)Cl
REA P47895 300.4 Da LogP 5.60 TPSA 37.3 1 viol. ✓ Clean CC1=C(C(CCC1)(C)C)/C=C/C(=C/C=C/C(=C/C(=O)O)/C)…
TXE P00352 667.5 Da LogP -2.95 TPSA 317.6 3 viol. ✓ Clean c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)…

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.