Protein profile

KP13_03588

hypothetical protein

Genome: KpKP13

Gene: AHE45931.1 Structure source: AlphaFold + ColabFold UniProt A0A0H3GJD1
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Amino acids 70
Annotations 1
Features 7
PDB binders 0
Druggability 0.12

Overview

Basic information about this protein and its source genome.

Accession
KP13_03588
Assembly
Klebsiella pneumoniae subsp. pneumoniae Kp13, complete sequence
Gene
AHE45931.1
Status
annotated
Amino acids
70
Structure source
AlphaFold + ColabFold
GO
GO:0003723 Binding to an RNA molecule or a portion thereof.

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Human identity (%)
0.0
Gut microbiome off-target
hit
Essential (DEG)
N
DEG identity (%)
0.0
Localization
Unknown
ColabFold pLDDT
92.9

Selected Druggability evidence

AlphaFold / UniProt model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.12
Structure A0A0H3GJD1
Pocket Pocket 1
P2Rank
Structure A0A0H3GJD1
Pocket No pockets
ColabFold model
FPocket 0.153 · Pocket 1
Core conservation Accessory gene
Roary accessory
CoreCruncher accessory
Gut microbiome 117 / 4744 genomes with a hit
Normalized 0.025

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

1 GO

Gene Ontology (GO)

1
  • GO:0003723 Binding to an RNA molecule or a portion thereof.

Sequence Features

Domain/signature hits from InterPro and related databases.

7 records
Show feature table
Start End DB Term Name
1 70 FunFam G3DSA:3.10.290.10:FF:000013 Ribosome-associated protein YbcJ
1 70 Gene3D G3DSA:3.10.290.10 -
1 70 InterPro IPR036986 RNA-binding S4 domain superfamily
12 68 ProSiteProfiles PS50889 S4 RNA-binding domain profile.
7 68 SUPERFAMILY SSF55174 Alpha-L RNA-binding motif
26 68 CDD cd00165 S4
9 68 Pfam PF13275 S4 domain

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

No pockets are loaded yet for the displayed AlphaFold model AF_A0A0H3GJD1 structure. Run experimental pocket backfill to show FPocket/P2Rank overlays on this structure.

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Structural evidence

0 + 2

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold AF_A0A0H3GJD1
AlphaFold — — full sequence — Viewing
ColabFold KP13_03588
ColabFold — — full sequence — Loaded