Protein profile

KP13_03701

Protein thiJ

Genome: KpKP13

Gene: AHE46038.1 thiJ Structure source: ColabFold
Amino acids 166
Annotations 0
Features 10
PDB binders 16
Druggability 0.694

Overview

Basic information about this protein and its source genome.

Accession
KP13_03701
Gene
AHE46038.1 thiJ
Status
annotated
Amino acids
166
Structure source
ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
hit
Human identity (%)
34.437
Human E-value
2.72e-18
Gut microbiome off-target
hit
Essential (DEG)
Y
DEG identity (%)
44.138
DEG E-value
4.75e-34
Localization
Unknown
ColabFold pLDDT
97.66

Selected Druggability evidence

ColabFold / curated model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.694
Structure CB_KP13_03701
Pocket Pocket 11
P2Rank 0.486
Structure CB_KP13_03701
Pocket Pocket 1
ColabFold model
FPocket 0.694 · Pocket 11
P2Rank 0.486 · Pocket 1
Core conservation Accessory gene
Roary core
CoreCruncher accessory
Gut microbiome 116 / 4744 genomes with a hit
Normalized 0.024

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

No GO or EC annotations are currently loaded for this protein.

Sequence Features

Domain/signature hits from InterPro and related databases.

10 records
Show feature table
Start End DB Term Name
1 165 Gene3D G3DSA:3.40.50.880 -
1 165 InterPro IPR029062 Class I glutamine amidotransferase-like
2 141 CDD cd03135 GATase1_DJ-1
3 157 SUPERFAMILY SSF52317 Class I glutamine amidotransferase-like
3 157 InterPro IPR029062 Class I glutamine amidotransferase-like
2 154 PANTHER PTHR48094 PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED
5 139 Pfam PF01965 DJ-1/PfpI family
5 139 InterPro IPR002818 DJ-1/PfpI
2 152 NCBIfam TIGR01383 DJ-1 family protein
2 152 InterPro IPR006287 Protein/nucleic acid deglycase DJ-1

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

Loading 3D structure...

Legend High Medium Low

Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
ColabFold KP13_03701
ColabFold full sequence Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
11 0.694
3 0.409

Pockets (P2RANK)

Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).

P2RANK Sticks Spheres Surfaces Score Probability Labels Zoom Positions
1 8.01 0.426
2 7.19 0.374
3 1.57 0.024
4 1.35 0.016

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

104 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
2HA O59413 90.1 Da LogP -1.46 TPSA 57.5 ✓ Ro5 ✓ Clean C(C(=O)CO)O
72R Q99497 165.1 Da LogP 0.96 TPSA 46.2 ✓ Ro5 ✓ Clean c1cc2c(cc1F)C(=O)C(=O)N2
72S Q99497 161.2 Da LogP 1.13 TPSA 46.2 ✓ Ro5 ✓ Clean Cc1cccc2c1NC(=O)C2=O
72T Q99497 215.1 Da LogP 1.84 TPSA 46.2 ✓ Ro5 ✓ Clean c1cc2c(c(c1)C(F)(F)F)NC(=O)C2=O
72U Q99497 205.2 Da LogP 0.61 TPSA 72.5 ✓ Ro5 ✓ Clean COC(=O)c1cccc2c1NC(=O)C2=O
72V Q99497 161.2 Da LogP 0.85 TPSA 37.4 ✓ Ro5 ✓ Clean CN1c2ccccc2C(=O)C1=O
73D Q99497 175.2 Da LogP 1.24 TPSA 37.4 ✓ Ro5 ✓ Clean CCN1c2ccccc2C(=O)C1=O
73G Q99497 261.3 Da LogP 1.56 TPSA 63.7 ✓ Ro5 ✓ Clean CCCCOC(=O)CN1c2ccccc2C(=O)C1=O
7MT O59413 556.4 Da LogP -2.25 TPSA 64.8 1 viol. ✓ Clean c1cc2[n+]3c(c1)C(=O)O[Tb]34567[n+]8c(cccc8C(=O)…
DTT Q99497 154.3 Da LogP -0.43 TPSA 40.5 ✓ Ro5 ✓ Clean C([C@@H]([C@H](CS)O)O)S
ISN Q99497 147.1 Da LogP 0.82 TPSA 46.2 ✓ Ro5 ✓ Clean c1ccc2c(c1)C(=O)C(=O)N2
MLA Q99497 104.1 Da LogP -0.45 TPSA 74.6 ✓ Ro5 ✓ Clean C(C(=O)O)C(=O)O
MLI O59413 102.0 Da LogP -3.12 TPSA 80.3 ✓ Ro5 ✓ Clean C(C(=O)[O-])C(=O)[O-]
P15 Q99497 296.4 Da LogP -0.29 TPSA 75.6 ✓ Ro5 ✓ Clean COCCOCCOCCOCCOCCOCCO
P4C Q99497 324.4 Da LogP -0.72 TPSA 92.7 ✓ Ro5 ✓ Clean C(COCCOCCOCCOCCOCCOCC=O)O
TLA Q99497 150.1 Da LogP -2.12 TPSA 115.1 ✓ Ro5 ✓ Clean [C@@H]([C@H](C(=O)O)O)(C(=O)O)O

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.