Protein profile

KP13_00382

General stress response CsbD-like protein

Genome: KpKP13

Gene: AHE46879.1 Structure source: AlphaFold + ColabFold UniProt A0A8D6F1M6
Export view
Amino acids 86
Annotations 0
Features 6
PDB binders 0
Druggability 0.639

Overview

Basic information about this protein and its source genome.

Accession
KP13_00382
Assembly
Klebsiella pneumoniae subsp. pneumoniae Kp13, complete sequence
Gene
AHE46879.1
Status
annotated
Amino acids
86
Structure source
AlphaFold + ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Human identity (%)
0.0
Gut microbiome off-target
hit
Essential (DEG)
N
DEG identity (%)
0.0
Localization
Unknown
ColabFold pLDDT
79.02

Selected Druggability evidence

AlphaFold / UniProt model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.639
Structure A0A8D6F1M6
Pocket Pocket 3
P2Rank
Structure A0A8D6F1M6
Pocket No pockets
ColabFold model
FPocket 0.067 · Pocket 2
Core conservation Accessory gene
Roary core
CoreCruncher accessory
Gut microbiome 111 / 4744 genomes with a hit
Normalized 0.023

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

No GO or EC annotations are currently loaded for this protein.

Sequence Features

Domain/signature hits from InterPro and related databases.

6 records
Show feature table
Start End DB Term Name
18 86 Gene3D G3DSA:1.10.1470.10 YjbJ
18 86 InterPro IPR036629 YjbJ superfamily
18 83 PANTHER PTHR34977 UPF0337 PROTEIN YJBJ
18 86 SUPERFAMILY SSF69047 Hypothetical protein YjbJ
21 73 Pfam PF05532 CsbD-like
21 73 InterPro IPR008462 CsbD-like domain

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

Loading 3D structure...

Legend High Medium Low

Structural evidence

0 + 2

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold AF_A0A8D6F1M6
AlphaFold — — full sequence — Viewing
ColabFold KP13_00382
ColabFold — — full sequence — Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
3 0.639