Protein profile
KP13_01361
DNA-directed RNA polymerase subunit beta'
Genome: KpKP13
Overview
Basic information about this protein and its source genome.
- Accession
- KP13_01361
- Gene
- AHE46938.1 rpoC
- Status
- annotated
- Amino acids
- 1407
- Structure source
- AlphaFold + ColabFold
Target profile
Computed evidence for target prioritization.
- Human off-target
- hit
- Human identity (%)
- 44.681
- Human E-value
- 9.73e-20
- Gut microbiome off-target
- hit
- Essential (DEG)
- Y
- DEG identity (%)
- 98.081
- DEG E-value
- 0.0
- Localization
- Cytoplasmic
- ColabFold pLDDT
- 86.11
Selected Druggability evidence
AlphaFold / UniProt modelSelected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.
Sequence
Primary amino-acid sequence viewer.
Functional Annotations
Enzyme classification and Gene Ontology terms linked to this protein.
Enzyme Commission (EC)
1Gene Ontology (GO)
7- GO:0003899 Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.
- GO:0003677 Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
- GO:0006351 The synthesis of an RNA transcript from a DNA template.
- GO:0005829 The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
- GO:0000428 A protein complex that possesses DNA-directed RNA polymerase activity.
- GO:0000287 Binding to a magnesium (Mg) ion.
- GO:0008270 Binding to a zinc ion (Zn).
Sequence Features
Domain/signature hits from InterPro and related databases.
Show feature table
| Start | End | DB | Term | Name |
|---|---|---|---|---|
| 184 | 218 | Coils | Coil | Coil |
| 948 | 1022 | FunFam | G3DSA:2.40.50.100:FF:000019 | DNA-directed RNA polymerase subunit beta |
| 19 | 1367 | NCBIfam | TIGR02386 | DNA-directed RNA polymerase subunit beta' |
| 19 | 1367 | InterPro | IPR012754 | DNA-directed RNA polymerase, subunit beta-prime, bacterial type |
| 1275 | 1295 | Coils | Coil | Coil |
| 373 | 416 | Gene3D | G3DSA:1.10.40.90 | - |
| 15 | 813 | CDD | cd01609 | RNAP_beta'_N |
| 907 | 1363 | CDD | cd02655 | RNAP_beta'_C |
| 1151 | 1215 | Gene3D | G3DSA:2.40.50.100 | - |
| 948 | 1022 | Gene3D | G3DSA:2.40.50.100 | - |
| 7 | 128 | Gene3D | G3DSA:4.10.860.120 | RNA polymerase II, clamp domain |
| 7 | 128 | InterPro | IPR044893 | RNA polymerase Rpb1, clamp domain superfamily |
| 10 | 1374 | Hamap | MF_01322 | DNA-directed RNA polymerase subunit beta' [rpoC]. |
| 10 | 1374 | InterPro | IPR012754 | DNA-directed RNA polymerase, subunit beta-prime, bacterial type |
| 1023 | 1126 | FunFam | G3DSA:2.40.50.100:FF:000016 | DNA-directed RNA polymerase subunit beta |
| 332 | 486 | Gene3D | G3DSA:2.40.40.20 | - |
| 235 | 514 | SMART | SM00663 | rpolaneu7 |
| 235 | 514 | InterPro | IPR006592 | RNA polymerase, N-terminal |
| 1316 | 1377 | FunFam | G3DSA:1.10.150.390:FF:000002 | DNA-directed RNA polymerase subunit beta'' |
| 1316 | 1375 | Gene3D | G3DSA:1.10.150.390 | - |
| 1135 | 1314 | Gene3D | G3DSA:1.10.1790.20 | - |
| 16 | 1363 | SUPERFAMILY | SSF64484 | beta and beta-prime subunits of DNA dependent RNA-polymerase |
| 15 | 342 | Pfam | PF04997 | RNA polymerase Rpb1, domain 1 |
| 15 | 342 | InterPro | IPR007080 | RNA polymerase Rpb1, domain 1 |
| 489 | 644 | Pfam | PF04983 | RNA polymerase Rpb1, domain 3 |
| 489 | 644 | InterPro | IPR007066 | RNA polymerase Rpb1, domain 3 |
| 1151 | 1215 | FunFam | G3DSA:2.40.50.100:FF:000012 | DNA-directed RNA polymerase subunit beta |
| 25 | 1363 | PANTHER | PTHR19376 | DNA-DIRECTED RNA POLYMERASE |
| 25 | 1363 | InterPro | IPR045867 | DNA-directed RNA polymerase, subunit beta-prime |
| 638 | 790 | Gene3D | G3DSA:1.10.132.30 | - |
| 638 | 790 | InterPro | IPR038120 | RNA polymerase Rpb1, funnel domain superfamily |
| 1023 | 1126 | Gene3D | G3DSA:2.40.50.100 | - |
| 674 | 763 | Pfam | PF05000 | RNA polymerase Rpb1, domain 4 |
| 674 | 763 | InterPro | IPR007083 | RNA polymerase Rpb1, domain 4 |
| 638 | 790 | FunFam | G3DSA:1.10.132.30:FF:000003 | DNA-directed RNA polymerase subunit beta |
| 489 | 637 | Gene3D | G3DSA:1.10.274.100 | RNA polymerase Rpb1, domain 3 |
| 489 | 637 | InterPro | IPR042102 | RNA polymerase Rpb1, domain 3 superfamily |
| 489 | 637 | FunFam | G3DSA:1.10.274.100:FF:000002 | DNA-directed RNA polymerase subunit beta |
| 372 | 413 | FunFam | G3DSA:1.10.40.90:FF:000001 | DNA-directed RNA polymerase subunit beta |
| 12 | 132 | FunFam | G3DSA:4.10.860.120:FF:000001 | DNA-directed RNA polymerase subunit beta |
| 392 | 485 | Pfam | PF00623 | RNA polymerase Rpb1, domain 2 |
| 392 | 485 | InterPro | IPR000722 | RNA polymerase, alpha subunit |
| 344 | 393 | Pfam | PF00623 | RNA polymerase Rpb1, domain 2 |
| 344 | 393 | InterPro | IPR000722 | RNA polymerase, alpha subunit |
| 766 | 1315 | Pfam | PF04998 | RNA polymerase Rpb1, domain 5 |
| 766 | 1315 | InterPro | IPR007081 | RNA polymerase Rpb1, domain 5 |
3D Structure
Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.
Loading 3D structure...
Structural evidence
0 + 2Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.
| Entry | Method | Resolution | Chain | Coverage | Links | Status |
|---|---|---|---|---|---|---|
|
AlphaFold
AF_A0A0H3GGP0
|
AlphaFold | — | — | full sequence | — | Viewing |
|
ColabFold
KP13_01361
|
ColabFold | — | — | full sequence | — | Loaded |
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer
Pockets (FPOCKET)
Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).
| FPOCKET | Sticks | Spheres | Surfaces | Druggability | Labels | Zoom | Positions |
|---|---|---|---|---|---|---|---|
| 100 | 0.373 | ||||||
| 7 | 0.333 | ||||||
| 12 | 0.237 |
Pockets (P2RANK)
Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).
| P2RANK | Sticks | Spheres | Surfaces | Score | Probability | Labels | Zoom | Positions |
|---|---|---|---|---|---|---|---|---|
| 1 | 14.1 | 0.711 | ||||||
| 2 | 8.41 | 0.448 | ||||||
| 3 | 5.89 | 0.288 | ||||||
| 4 | 5.28 | 0.248 | ||||||
| 5 | 3.8 | 0.147 |
Pockets (FPOCKET)
Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).
| FPOCKET | Sticks | Spheres | Surfaces | Druggability | Labels | Zoom | Positions |
|---|---|---|---|---|---|---|---|
| 116 | 0.723 | ||||||
| 35 | 0.617 | ||||||
| 5 | 0.504 |
Pockets (P2RANK)
Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).
| P2RANK | Sticks | Spheres | Surfaces | Score | Probability | Labels | Zoom | Positions |
|---|---|---|---|---|---|---|---|---|
| 1 | 13.18 | 0.676 | ||||||
| 2 | 10.0 | 0.538 | ||||||
| 3 | 4.68 | 0.204 | ||||||
| 4 | 4.63 | 0.201 | ||||||
| 5 | 4.36 | 0.182 |
Ligand evidence
Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.
Highest-confidence structural evidence: ligands co-crystallized with this exact protein. If the source PDB is loaded in TPW, use Open crystal to inspect it in the structure viewer.
No PDB structure with a co-crystallized ligand found for this exact protein.
Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.
| Ligand | Source crystal | UniProt (homolog) | MW · LogP · TPSA | Lipinski | PAINS | SMILES |
|---|---|---|---|---|---|---|
| 0O2 | P0A8T7 | 683.1 Da LogP -2.10 TPSA 392.2 | 3 viol. | ✓ Clean |
c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O…
|
|
| 118 | P0A8T7 | 430.2 Da LogP 3.06 TPSA 0.0 | ✓ Ro5 | ✓ Clean |
c1ccc(cc1)[Sb+](c2ccccc2)(c3ccccc3)c4ccccc4
|
|
| 1N7 | P0A8T7 | 631.9 Da LogP 2.20 TPSA 164.4 | 2 viol. | ✓ Clean |
C[C@H](CCC(=O)NCCC[N+](C)(C)CC(CS(=O)(=O)O)O)[C…
|
|
| 2KH | P04050 | 483.2 Da LogP -2.93 TPSA 267.2 | 2 viol. | ✓ Clean |
C1=CN(C(=O)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)C…
|
|
| 2TM | Q8RQE8 | 481.2 Da LogP -2.10 TPSA 261.2 | 2 viol. | ✓ Clean |
C1=CN(C(=O)N=C1N)[C@H]2[C@@H]([C@@H]([C@H](O2)C…
|
|
| 42S | A7ZUK2 | 280.2 Da LogP 3.95 TPSA 44.6 | ✓ Ro5 | ✓ Clean |
c1ccc(cc1)N/C(=N\O)/c2cccc(c2)C(F)(F)F
|
|
| 42T | A7ZUK2 | 483.3 Da LogP 6.71 TPSA 85.8 | 1 viol. | ✓ Clean |
c1ccc(cc1)/N=C(\c2cc(cc(c2)NC(=O)Nc3c(cccc3Cl)C…
|
|
| 42U | A7ZUK2 | 433.5 Da LogP 4.22 TPSA 56.0 | ✓ Ro5 | ✓ Clean |
c1cc(ccc1c2c(c[nH]n2)c3ccc(c(c3)C(F)(F)F)NCCN4C…
|
|
| 4C2 | A7ZUK2 | 512.5 Da LogP 2.47 TPSA 121.6 | 1 viol. | ✓ Clean |
Cc1c(c(on1)C)S(=O)(=O)NC2=C(C(=O)C2=O)N3CCC(CC3…
|
|
| 4C4 | A7ZUK2 | 431.5 Da LogP 5.36 TPSA 105.8 | 1 viol. | ✓ Clean |
CCCC/C(=C/C=C(\C)/C(=O)C1=C(C=C(OC1=O)[C@H](C)C…
|
|
| 4C6 | A7ZUK2 | 443.5 Da LogP 2.46 TPSA 109.6 | ✓ Ro5 | ✓ Clean |
Cc1ccc(cc1)CC2CCN(CC2)C3=C(C(=O)C3=O)NS(=O)(=O)…
|
|
| 4OD | P0A8T7 | 377.1 Da LogP 4.66 TPSA 44.6 | ✓ Ro5 | ✓ Clean |
c1cc(cc(c1)Br)/N=C(\c2ccc(c(c2)C(F)(F)F)F)/NO
|
|
| 4OE | P0A8T7 | 324.3 Da LogP 5.04 TPSA 28.7 | 1 viol. | ✓ Clean |
c1cc(ccc1c2c(cn[nH]2)c3ccc(c(c3)C(F)(F)F)F)F
|
|
| 88D | P9WGY7 | 411.4 Da LogP 3.03 TPSA 58.2 | ✓ Ro5 | ✓ Clean |
Cc1ccccc1NC(=O)[C@@H](Cc2ccccc2)NC(=O)c3ccc[se]3
|
|
| 88G | P9WGY7 | 358.4 Da LogP 3.97 TPSA 58.2 | ✓ Ro5 | ✓ Clean |
Cc1ccccc1NC(=O)[C@@H](Cc2ccccc2)NC(=O)c3ccccc3
|
|
| AHW | P04050 | 186.3 Da LogP 3.41 TPSA 9.2 | ✓ Ro5 | ✓ Clean |
CCc1ccc2ccc(cc2c1)OC
|
|
| APC | Q8RQE8 | 505.2 Da LogP -1.52 TPSA 269.9 | 3 viol. | ✓ Clean |
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)…
|
|
| C | Q8RQE8 | 323.2 Da LogP -2.45 TPSA 177.4 | ✓ Ro5 | ✓ Clean |
C1=CN(C(=O)N=C1N)[C@H]2[C@@H]([C@@H]([C@H](O2)C…
|
|
| C0L | P9WGY7 | 527.7 Da LogP 6.04 TPSA 122.2 | 2 viol. | ✓ Clean |
C/C=C/C/C=C(\C)/[C@@H](CC/C(=C/C=C(\C)/C(=C1C(=…
|
|
| CH1 | Q8RQE8 | 467.2 Da LogP -1.18 TPSA 250.2 | 2 viol. | ✓ Clean |
C1[C@H](O[C@H]([C@@H]1O)N2C=CC(=NC2=O)N)CO[P@](…
|
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| DCP | Q8RQE8 | 467.2 Da LogP -1.18 TPSA 250.2 | 2 viol. | ✓ Clean |
C1[C@@H]([C@H](O[C@H]1N2C=CC(=NC2=O)N)CO[P@@](=…
|
|
| DGT | P04050 | 507.2 Da LogP -1.31 TPSA 278.9 | 3 viol. | ✓ Clean |
c1nc2c(n1[C@H]3C[C@@H]([C@H](O3)CO[P@@](=O)(O)O…
|
|
| DPO | P0A8T7 | 173.9 Da LogP -3.34 TPSA 135.6 | ✓ Ro5 | ✓ Clean |
[O-]P(=O)([O-])OP(=O)([O-])[O-]
|
|
| DUT | P04050 | 468.1 Da LogP -1.47 TPSA 244.1 | 2 viol. | ✓ Clean |
C1[C@@H]([C@H](O[C@H]1N2C=CC(=O)NC2=O)CO[P@@](=…
|
|
| FI8 | P9WGY7 | 1058.1 Da LogP 6.23 TPSA 266.7 | 4 viol. | ✓ Clean |
CCc1c(c(c(c(c1Cl)O)Cl)O)C(=O)O[C@@H]2[C@H](O[C@…
|
|
| G2P | P04050 | 521.2 Da LogP -2.22 TPSA 289.9 | 3 viol. | ✓ Clean |
c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O…
|
|
| G4P | P0A8T7 | 603.2 Da LogP -2.22 TPSA 345.6 | 3 viol. | ✓ Clean |
c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O…
|
|
| NE6 | Q8RQE8 | 417.5 Da LogP 4.52 TPSA 99.1 | ✓ Ro5 | ✓ Clean |
CCC/C(=C/C=C(\C)/C(=O)C1C(=O)C=C(OC1=O)[C@H](C)…
|
|
| POP | Q8RQE8 | 176.0 Da LogP -2.08 TPSA 129.9 | ✓ Ro5 | ✓ Clean |
O[P@@](=O)([O-])O[P@@](=O)(O)[O-]
|
|
| PPV | P04050 | 178.0 Da LogP -0.81 TPSA 124.3 | ✓ Ro5 | ✓ Clean |
OP(=O)(O)OP(=O)(O)O
|
|
| PUM | Q8RQE8 | 486.4 Da LogP -5.32 TPSA 290.0 | 1 viol. | ✓ Clean |
[H]/N=C(/N)\NCC(=O)N([C@@H](CCC(=O)N)C(=O)NC[C@…
|
|
| QZY | P0A8T7 | 472.6 Da LogP 6.96 TPSA 78.9 | 1 viol. | ✓ Clean |
CCN(Cc1ccccc1)C(=O)Nc2cc(sc2C(=O)O)c3ccc(cc3)Oc…
|
|
| RFP | P9WGY7 | 823.0 Da LogP 4.34 TPSA 220.1 | 3 viol. | Alert |
Cc1c(c2c3c4c1O[C@@](C4=O)(O\C=C\[C@@H]([C@H]([C…
|
|
| STD | Q8RQE8 | 600.7 Da LogP 2.46 TPSA 147.2 | 1 viol. | ✓ Clean |
C[C@H]1[C@H]2C=C[C@@]3(CO3)[C@](O2)(O[C@@H]1[C@…
|
|
| TGT | Q8RQE8 | 416.3 Da LogP -3.13 TPSA 228.9 | 1 viol. | ✓ Clean |
CC(=O)O[C@@H]1[C@@H]([C@H]([C@]2(CS[C@]([C@@H]1…
|
Experimental bioactivity from ChEMBL measured directly on this protein. Score = pchembl (−log Ki/IC₅₀; higher = more potent).
No ChEMBL bioactivity data found for this exact protein.
Bioactivity inferred from similar proteins in ChEMBL. Score = pchembl (−log Ki/IC₅₀; higher = more potent).
| Ligand | UniProt (homolog) | pchembl | MW · LogP · TPSA | Lipinski | PAINS | SMILES |
|---|---|---|---|---|---|---|
| CHEMBL486231 | P24928 | — | 500.2 Da LogP -1.13 TPSA 244.1 | 3 viol. | ✓ Clean |
C[C@@]1(F)[C@H](O)[C@@H](COP(=O)(O)OP(=O)(O)OP(…
|
| CHEMBL573352 | P24928 | — | 267.2 Da LogP -2.56 TPSA 130.8 | ✓ Ro5 | ✓ Clean |
C#C[C@@]1(O)[C@@H](CO)O[C@@H](n2ccc(N)nc2=O)[C@…
|
Proposed virtual-screening candidates from ZINC. Score = Tanimoto similarity to a known binder (0–1; higher = more similar).
| Ligand | Tanimoto | MW · LogP · TPSA | Lipinski | PAINS | SMILES |
|---|---|---|---|---|---|
| ZINC2382315452 | 1.000 | 416.3 Da LogP -3.13 TPSA 228.9 | 1 viol. | ✓ Clean |
CC(=O)O[C@H]1[C@@H]2O[C@@](C(=O)O)(CS[C@]2(O)C(…
|
| ZINC2852913 | 1.000 | 358.4 Da LogP 3.97 TPSA 58.2 | ✓ Ro5 | ✓ Clean |
Cc1ccccc1NC(=O)[C@@H](Cc1ccccc1)NC(=O)c1ccccc1
|
| ZINC2852914 | 1.000 | 358.4 Da LogP 3.97 TPSA 58.2 | ✓ Ro5 | ✓ Clean |
Cc1ccccc1NC(=O)[C@H](Cc1ccccc1)NC(=O)c1ccccc1
|
| ZINC150304238 | 0.910 | 486.4 Da LogP -5.32 TPSA 290.0 | 1 viol. | ✓ Clean |
N=C(N)NCC(=O)N(O)[C@@H](CCC(N)=O)C(=O)NC[C@H]1O…
|
| ZINC104869865 | 0.823 | 443.2 Da LogP -2.45 TPSA 252.6 | 2 viol. | ✓ Clean |
Nc1nc2c(ncn2[C@H]2O[C@H](CO[P@@](=O)(O)OP(=O)(O…
|
| ZINC12504289 | 0.823 | 443.2 Da LogP -2.45 TPSA 252.6 | 2 viol. | ✓ Clean |
Nc1nc2c(ncn2[C@@H]2O[C@H](CO[P@@](=O)(O)OP(=O)(…
|
| ZINC34541308 | 0.823 | 443.2 Da LogP -2.45 TPSA 252.6 | 2 viol. | ✓ Clean |
Nc1nc2c(ncn2[C@@H]2O[C@H](CO[P@@](=O)(O)OP(=O)(…
|
| ZINC35000839 | 0.823 | 443.2 Da LogP -2.45 TPSA 252.6 | 2 viol. | ✓ Clean |
Nc1nc2c(ncn2[C@H]2O[C@@H](CO[P@@](=O)(O)OP(=O)(…
|
| ZINC45284491 | 0.823 | 443.2 Da LogP -2.45 TPSA 252.6 | 2 viol. | ✓ Clean |
Nc1nc2c(ncn2[C@H]2O[C@@H](CO[P@@](=O)(O)OP(=O)(…
|
| ZINC80639694 | 0.823 | 443.2 Da LogP -2.45 TPSA 252.6 | 2 viol. | ✓ Clean |
Nc1nc2c(ncn2[C@@H]2O[C@H](CO[P@@](=O)(O)OP(=O)(…
|
| ZINC8215481 | 0.823 | 443.2 Da LogP -2.45 TPSA 252.6 | 2 viol. | ✓ Clean |
Nc1nc2c(ncn2[C@@H]2O[C@H](CO[P@@](=O)(O)OP(=O)(…
|
| ZINC150292410 | 0.817 | 487.4 Da LogP -4.72 TPSA 284.2 | 1 viol. | ✓ Clean |
N=C(N)NCC(=O)N(O)[C@@H](CCC(=O)O)C(=O)NC[C@H]1O…
|
| ZINC1600536 | 0.762 | 296.4 Da LogP 2.68 TPSA 58.2 | ✓ Ro5 | ✓ Clean |
CC(=O)N[C@H](Cc1ccccc1)C(=O)Nc1ccccc1C
|
| ZINC6491543 | 0.762 | 296.4 Da LogP 2.68 TPSA 58.2 | ✓ Ro5 | ✓ Clean |
CC(=O)N[C@@H](Cc1ccccc1)C(=O)Nc1ccccc1C
|
| ZINC12503703 | 0.727 | 427.2 Da LogP -1.42 TPSA 232.3 | 2 viol. | ✓ Clean |
Nc1nc2c(ncn2[C@@H]2C[C@H](O)[C@@H](CO[P@@](=O)(…
|
| ZINC8215878 | 0.727 | 427.2 Da LogP -1.42 TPSA 232.3 | 2 viol. | ✓ Clean |
Nc1nc2c(ncn2[C@H]2C[C@H](O)[C@@H](CO[P@@](=O)(O…
|
| ZINC2651112 | 0.723 | 364.5 Da LogP 4.04 TPSA 58.2 | ✓ Ro5 | ✓ Clean |
Cc1ccccc1NC(=O)[C@H](Cc1ccccc1)NC(=O)c1cccs1
|
| ZINC12503440 | 0.708 | 363.2 Da LogP -2.57 TPSA 206.0 | 1 viol. | ✓ Clean |
Nc1nc2c(ncn2[C@@H]2O[C@H](CO)[C@@H](OP(=O)(O)O)…
|
| ZINC1530370 | 0.708 | 363.2 Da LogP -2.57 TPSA 206.0 | 1 viol. | ✓ Clean |
Nc1nc2c(ncn2[C@H]2O[C@@H](CO)[C@H](OP(=O)(O)O)[…
|
| ZINC28631009 | 0.708 | 363.2 Da LogP -2.57 TPSA 206.0 | 1 viol. | ✓ Clean |
Nc1nc2c(ncn2[C@@H]2O[C@H](CO)[C@H](OP(=O)(O)O)[…
|
| ZINC3872740 | 0.708 | 363.2 Da LogP -2.57 TPSA 206.0 | 1 viol. | ✓ Clean |
Nc1nc2c(ncn2[C@H]2O[C@@H](CO)[C@@H](OP(=O)(O)O)…
|
| ZINC3872741 | 0.708 | 363.2 Da LogP -2.57 TPSA 206.0 | 1 viol. | ✓ Clean |
Nc1nc2c(ncn2[C@@H]2O[C@@H](CO)[C@@H](OP(=O)(O)O…
|
| ZINC3872742 | 0.708 | 363.2 Da LogP -2.57 TPSA 206.0 | 1 viol. | ✓ Clean |
Nc1nc2c(ncn2[C@H]2O[C@@H](CO)[C@@H](OP(=O)(O)O)…
|
| ZINC3872743 | 0.708 | 363.2 Da LogP -2.57 TPSA 206.0 | 1 viol. | ✓ Clean |
Nc1nc2c(ncn2[C@@H]2O[C@@H](CO)[C@@H](OP(=O)(O)O…
|
| ZINC12501413 | 0.703 | 363.2 Da LogP -2.57 TPSA 206.0 | 1 viol. | ✓ Clean |
Nc1nc2c(ncn2[C@@H]2O[C@H](COP(=O)(O)O)[C@@H](O)…
|
| ZINC12958448 | 0.703 | 363.2 Da LogP -2.57 TPSA 206.0 | 1 viol. | ✓ Clean |
Nc1nc2c(ncn2[C@@H]2O[C@H](COP(=O)(O)O)[C@H](O)[…
|
| ZINC1532555 | 0.703 | 363.2 Da LogP -2.57 TPSA 206.0 | 1 viol. | ✓ Clean |
Nc1nc2c(ncn2[C@H]2O[C@@H](COP(=O)(O)O)[C@H](O)[…
|
| ZINC16546189 | 0.703 | 363.2 Da LogP -2.57 TPSA 206.0 | 1 viol. | ✓ Clean |
Nc1nc2c(ncn2[C@@H]2O[C@H](COP(=O)(O)O)[C@H](O)[…
|
| ZINC2159505 | 0.703 | 363.2 Da LogP -2.57 TPSA 206.0 | 1 viol. | ✓ Clean |
Nc1nc2c(ncn2[C@@H]2O[C@H](COP(=O)(O)O)[C@@H](O)…
|
| ZINC3073318 | 0.703 | 363.2 Da LogP -2.57 TPSA 206.0 | 1 viol. | ✓ Clean |
Nc1nc2c(ncn2[C@H]2O[C@@H](COP(=O)(O)O)[C@@H](O)…
|
| ZINC3869963 | 0.703 | 363.2 Da LogP -2.57 TPSA 206.0 | 1 viol. | ✓ Clean |
Nc1nc2c(ncn2[C@H]2O[C@@H](COP(=O)(O)O)[C@@H](O)…
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| ZINC3869965 | 0.703 | 363.2 Da LogP -2.57 TPSA 206.0 | 1 viol. | ✓ Clean |
Nc1nc2c(ncn2[C@@H]2O[C@@H](COP(=O)(O)O)[C@@H](O…
|
| ZINC9334496 | 0.703 | 363.2 Da LogP -2.57 TPSA 206.0 | 1 viol. | ✓ Clean |
Nc1nc2c(ncn2[C@H]2O[C@@H](COP(=O)(O)O)[C@H](O)[…
|
| ZINC6650165 | 0.696 | 412.4 Da LogP 4.69 TPSA 58.2 | ✓ Ro5 | ✓ Clean |
O=C(N[C@@H](Cc1ccccc1)C(=O)Nc1ccccc1C(F)(F)F)c1…
|
| ZINC6650169 | 0.696 | 412.4 Da LogP 4.69 TPSA 58.2 | ✓ Ro5 | ✓ Clean |
O=C(N[C@H](Cc1ccccc1)C(=O)Nc1ccccc1C(F)(F)F)c1c…
|
| ZINC72399572 | 0.692 | 492.7 Da LogP 3.43 TPSA 93.0 | ✓ Ro5 | ✓ Clean |
C[C@H](CCC(=O)NCCCN(C)C)[C@H]1CC[C@H]2[C@H]3[C@…
|
| ZINC1601274 | 0.690 | 344.4 Da LogP 3.67 TPSA 58.2 | ✓ Ro5 | ✓ Clean |
O=C(N[C@@H](Cc1ccccc1)C(=O)Nc1ccccc1)c1ccccc1
|
| ZINC6575235 | 0.690 | 344.4 Da LogP 3.67 TPSA 58.2 | ✓ Ro5 | ✓ Clean |
O=C(N[C@H](Cc1ccccc1)C(=O)Nc1ccccc1)c1ccccc1
|
| ZINC1157590 | 0.689 | 358.4 Da LogP 3.97 TPSA 58.2 | ✓ Ro5 | ✓ Clean |
Cc1ccc(NC(=O)[C@@H](Cc2ccccc2)NC(=O)c2ccccc2)cc1
|
| ZINC1157591 | 0.689 | 358.4 Da LogP 3.97 TPSA 58.2 | ✓ Ro5 | ✓ Clean |
Cc1ccc(NC(=O)[C@H](Cc2ccccc2)NC(=O)c2ccccc2)cc1
|
| ZINC1889002139 | 0.684 | 449.7 Da LogP 3.89 TPSA 89.8 | ✓ Ro5 | ✓ Clean |
CCCNC(=O)CC[C@@H](C)[C@H]1CC[C@@H]2[C@H]3[C@H](…
|
| ZINC1889002140 | 0.684 | 449.7 Da LogP 3.89 TPSA 89.8 | ✓ Ro5 | ✓ Clean |
CCCNC(=O)CC[C@@H](C)[C@H]1CC[C@@H]2[C@H]3[C@H](…
|
| ZINC1889002141 | 0.684 | 449.7 Da LogP 3.89 TPSA 89.8 | ✓ Ro5 | ✓ Clean |
CCCNC(=O)CC[C@@H](C)[C@H]1CC[C@@H]2[C@@H]3[C@H]…
|
| ZINC1889002142 | 0.684 | 449.7 Da LogP 3.89 TPSA 89.8 | ✓ Ro5 | ✓ Clean |
CCCNC(=O)CC[C@@H](C)[C@H]1CC[C@@H]2[C@@H]3[C@H]…
|
| ZINC33637075 | 0.667 | 200.3 Da LogP 3.80 TPSA 9.2 | ✓ Ro5 | ✓ Clean |
CCCc1ccc2cc(OC)ccc2c1
|
| ZINC11571738 | 0.660 | 427.5 Da LogP 4.58 TPSA 61.4 | ✓ Ro5 | Alert |
Cc1cc(N2CCCC2)ccc1NC(=O)[C@@H](Cc1ccccc1)NC(=O)…
|
| ZINC11571742 | 0.660 | 427.5 Da LogP 4.58 TPSA 61.4 | ✓ Ro5 | Alert |
Cc1cc(N2CCCC2)ccc1NC(=O)[C@H](Cc1ccccc1)NC(=O)c…
|
| ZINC22067099 | 0.660 | 373.5 Da LogP 4.08 TPSA 55.4 | ✓ Ro5 | ✓ Clean |
Cc1ccccc1COC(=O)[C@@H](Cc1ccccc1)NC(=O)c1ccccc1
|
| ZINC22067102 | 0.660 | 373.5 Da LogP 4.08 TPSA 55.4 | ✓ Ro5 | ✓ Clean |
Cc1ccccc1COC(=O)[C@H](Cc1ccccc1)NC(=O)c1ccccc1
|
| ZINC543330 | 0.659 | 298.3 Da LogP 2.81 TPSA 78.4 | ✓ Ro5 | ✓ Clean |
Cc1ccccc1NC(=O)N[C@@H](Cc1ccccc1)C(=O)O
|
PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.