Protein profile

KP13_02702

Peptidyl-prolyl cis-trans isomerase C

Genome: KpKP13

Gene: AHE47010.1 Structure source: AlphaFold + ColabFold UniProt A0A0H3GGG7
Amino acids 93
Annotations 3
Features 9
PDB binders 41
Druggability 0.268

Overview

Basic information about this protein and its source genome.

Accession
KP13_02702
Gene
AHE47010.1
Status
annotated
Amino acids
93
Structure source
AlphaFold + ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
hit
Human identity (%)
45.055
Human E-value
2.17e-17
Gut microbiome off-target
hit
Essential (DEG)
Y
DEG identity (%)
47.727
DEG E-value
2.49e-24
Localization
Cytoplasmic
ColabFold pLDDT
86.71

Selected Druggability evidence

AlphaFold / UniProt model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.268
Structure A0A0H3GGG7
Pocket Pocket 4
P2Rank 0.306
Structure A0A0H3GGG7
Pocket Pocket 1
ColabFold model
FPocket 0.582 · Pocket 2
P2Rank 0.345 · Pocket 1
Core conservation Conserved core gene
Roary core
CoreCruncher core
Gut microbiome 184 / 4744 genomes with a hit
Normalized 0.039

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

1 EC 2 GO

Enzyme Commission (EC)

1

Gene Ontology (GO)

2
  • GO:0003755 Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
  • GO:0005737 The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Sequence Features

Domain/signature hits from InterPro and related databases.

9 records
Show feature table
Start End DB Term Name
3 93 PANTHER PTHR43629 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
5 90 SUPERFAMILY SSF54534 FKBP-like
2 93 Gene3D G3DSA:3.10.50.40 -
2 93 InterPro IPR046357 Peptidyl-prolyl cis-trans isomerase domain superfamily
31 51 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature.
31 51 InterPro IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site
2 91 ProSiteProfiles PS50198 PpiC-type peptidyl-prolyl cis-trans isomerase family profile.
2 91 InterPro IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type
14 91 Pfam PF13616 PPIC-type PPIASE domain

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

Loading 3D structure...

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Structural evidence

0 + 2

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold AF_A0A0H3GGG7
AlphaFold full sequence Viewing
ColabFold KP13_02702
ColabFold full sequence Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
4 0.268

Pockets (P2RANK)

Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).

P2RANK Sticks Spheres Surfaces Score Probability Labels Zoom Positions
1 4.4 0.185

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

129 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
12P Q13526 546.7 Da LogP -0.85 TPSA 142.0 2 viol. ✓ Clean C(COCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCO)O
15P Q13526 1529.8 Da LogP 0.17 TPSA 334.1 2 viol. ✓ Clean COCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCO…
16P Q13526 294.4 Da LogP 1.13 TPSA 55.4 ✓ Ro5 ✓ Clean CCOCCOCCOCCOCCOCCOCC
1PG Q13526 252.3 Da LogP -0.31 TPSA 66.4 ✓ Ro5 ✓ Clean COCCOCCOCCOCCOCCO
2NV Q81CB1 279.4 Da LogP 0.44 TPSA 72.2 ✓ Ro5 ✓ Clean CCOCCOCCOCCOCCOC[C@@H](C)N
39X Q13526 377.4 Da LogP 3.28 TPSA 95.1 ✓ Ro5 ✓ Clean c1ccc2cc(ccc2c1)C(=O)N[C@H](Cc3[nH]c4cc(ccc4n3)…
3T5 Q13526 472.4 Da LogP 2.01 TPSA 141.4 ✓ Ro5 ✓ Clean C[C@@H]1C[C@H]2[C@@H]3CCC4=CC(=O)C=C[C@@]4([C@]…
3TB Q13526 567.6 Da LogP -0.89 TPSA 256.0 2 viol. ✓ Clean [H]/N=C(\N)/NCCC[C@@H](C(=O)N)NC(=O)[C@@H]\1CCC…
4BL Q13526 175.2 Da LogP 2.17 TPSA 53.1 ✓ Ro5 ✓ Clean Cc1ccc2cc([nH]c2c1)C(=O)O
4BX Q13526 190.2 Da LogP 1.58 TPSA 66.0 ✓ Ro5 ✓ Clean c1ccc2c(c1)[nH]c(n2)CCC(=O)O
4BY Q13526 175.2 Da LogP 2.17 TPSA 53.1 ✓ Ro5 ✓ Clean Cc1ccc2c(c1)cc([nH]2)C(=O)O
4C0 Q13526 337.4 Da LogP 2.31 TPSA 95.1 ✓ Ro5 ✓ Clean c1ccc(cc1)CCC(=O)N[C@H](Cc2[nH]c3ccccc3n2)C(=O)O
4D7 Q13526 313.3 Da LogP 1.89 TPSA 108.2 ✓ Ro5 ✓ Clean Cc1c(cco1)C(=O)N[C@H](Cc2[nH]c3ccccc3n2)C(=O)O
4D9 Q13526 365.4 Da LogP 3.20 TPSA 95.1 ✓ Ro5 ✓ Clean c1ccc2c(c1)cc(s2)C(=O)N[C@H](Cc3[nH]c4ccccc4n3)…
4DH Q13526 389.4 Da LogP 2.39 TPSA 112.9 ✓ Ro5 ✓ Clean Cn1c(cc(n1)c2ccccc2)C(=O)N[C@H](Cc3[nH]c4ccccc4…
4F8 Q13526 232.2 Da LogP 1.47 TPSA 103.3 ✓ Ro5 ✓ Clean c1ccc(cc1)c2[nH]c(c(n2)C(=O)O)C(=O)O
4FF Q13526 202.2 Da LogP 2.08 TPSA 66.0 ✓ Ro5 ✓ Clean Cc1c(nc([nH]1)c2ccccc2)C(=O)O
4FY Q13526 301.3 Da LogP 1.25 TPSA 95.5 ✓ Ro5 ✓ Clean c1ccc(cc1)c2[nH]c(c(n2)C(=O)N3CCOCC3)C(=O)O
4G2 Q13526 236.7 Da LogP 2.74 TPSA 66.0 ✓ Ro5 ✓ Clean Cc1c(nc([nH]1)c2cccc(c2)Cl)C(=O)O
4G5 Q13526 302.3 Da LogP 0.33 TPSA 129.4 ✓ Ro5 ✓ Clean CN(CC(=O)N)C(=O)c1c([nH]c(n1)c2ccccc2)C(=O)O
4G8 Q13526 379.4 Da LogP 2.50 TPSA 123.6 ✓ Ro5 ✓ Clean c1ccc(cc1)CN(CC(=O)O)C(=O)c2c([nH]c(n2)c3ccccc3…
4GE Q13526 369.8 Da LogP 3.70 TPSA 86.3 ✓ Ro5 ✓ Clean CN(Cc1ccccc1)C(=O)c2c(nc([nH]2)c3cccc(c3)Cl)C(=…
B21 Q13526 218.2 Da LogP 2.65 TPSA 59.7 ✓ Ro5 ✓ Clean COc1ccccc1c2ccc(o2)C(=O)O
D1D Q9Y237 152.2 Da LogP 0.10 TPSA 40.5 ✓ Ro5 ✓ Clean C1[C@H]([C@@H](CSS1)O)O
DTT Q13526 154.3 Da LogP -0.43 TPSA 40.5 ✓ Ro5 ✓ Clean C([C@@H]([C@H](CS)O)O)S
G14 Q13526 188.2 Da LogP 1.77 TPSA 66.0 ✓ Ro5 ✓ Clean c1ccc(cc1)c2[nH]cc(n2)C(=O)O
GIA Q13526 337.4 Da LogP 3.40 TPSA 66.4 ✓ Ro5 ✓ Clean c1ccc2cc(ccc2c1)C(=O)N[C@H](Cc3cccc(c3)F)C(=O)O
ICB P56112 161.2 Da LogP 1.87 TPSA 53.1 ✓ Ro5 ✓ Clean c1ccc2c(c1)cc([nH]2)C(=O)O
J8Z Q13526 403.4 Da LogP 2.40 TPSA 101.5 ✓ Ro5 ✓ Clean Cc1cccc(c1)C[C@H](COP(=O)([O-])[O-])NC(=O)c2cc3…
J9Z Q13526 389.4 Da LogP 2.09 TPSA 101.5 ✓ Ro5 ✓ Clean c1ccc(cc1)C[C@H](COP(=O)([O-])[O-])NC(=O)c2cc3c…
JZI Q13526 345.4 Da LogP 4.13 TPSA 66.4 ✓ Ro5 ✓ Clean c1ccc(cc1)/C=C/C[C@H](C(=O)O)NC(=O)c2ccc3ccccc3…
KDH Q13526 458.4 Da LogP 2.23 TPSA 197.4 2 viol. Alert c1c(cc(c(c1O)O)O)[C@@H]2[C@@H](Cc3c(cc(cc3O2)O)…
O4B Q13526 264.3 Da LogP 0.10 TPSA 55.4 ✓ Ro5 ✓ Clean C1COCCOCCOCCOCCOCCO1
ODK Q13526 189.2 Da LogP 1.17 TPSA 78.9 ✓ Ro5 ✓ Clean c1ccnc(c1)c2cc([nH]n2)C(=O)O
PE4 Q13526 354.4 Da LogP 0.11 TPSA 84.8 ✓ Ro5 ✓ Clean CCOCCOCCOCCOCCOCCOCCOCCO
PE8 Q13526 370.4 Da LogP -0.91 TPSA 105.1 ✓ Ro5 ✓ Clean C(COCCOCCOCCOCCOCCOCCOCCO)O
QT7 Q13526 281.8 Da LogP 1.29 TPSA 54.5 ✓ Ro5 ✓ Clean CC(C)(C)CN([C@@H]1CCS(=O)(=O)C1)C(=O)CCl
R2Z Q13526 448.4 Da LogP -1.83 TPSA 229.9 1 viol. ✓ Clean [H]/N=C(\N)/NCCC[C@@H](C(=O)N)NC(=O)[C@@H]\1CCC…
REA Q13526 300.4 Da LogP 5.60 TPSA 37.3 1 viol. ✓ Clean CC1=C(C(CCC1)(C)C)/C=C/C(=C/C=C/C(=C/C(=O)O)/C)…
RZD Q13526 452.4 Da LogP 0.91 TPSA 144.0 ✓ Ro5 ✓ Clean CC(=O)N[C@H](C[N@@]1CCC[C@H]1C(=O)NCCc2c[nH]c3c…
TAS Q13526 125.9 Da LogP -2.05 TPSA 60.7 ✓ Ro5 ✓ Clean O[As](O)O

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.