Protein profile

KP13_32091

ATPases of the AAA+ class

Genome: KpKP13

Gene: AHE41921.1 Structure source: AlphaFold + ColabFold UniProt A0A0H3GWN5
Amino acids 487
Annotations 2
Features 10
PDB binders 9
Druggability 0.731

Overview

Basic information about this protein and its source genome.

Accession
KP13_32091
Gene
AHE41921.1
Status
annotated
Amino acids
487
Structure source
AlphaFold + ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
hit
Human identity (%)
36.905
Human E-value
4.22e-06
Gut microbiome off-target
hit
Essential (DEG)
N
DEG identity (%)
0.0
Localization
CytoplasmicMembrane
ColabFold pLDDT
87.25

Selected Druggability evidence

AlphaFold / UniProt model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.731
Structure A0A0H3GWN5
Pocket Pocket 39
P2Rank 0.786
Structure A0A0H3GWN5
Pocket Pocket 1
ColabFold model
FPocket 0.44 · Pocket 1
P2Rank 0.84 · Pocket 1
Core conservation Accessory gene
Roary accessory
CoreCruncher accessory
Gut microbiome 2 / 4744 genomes with a hit
Normalized 0

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

2 GO

Gene Ontology (GO)

2
  • GO:0005524 Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
  • GO:0016887 Catalysis of the reaction: ATP + H2O = ADP + H+ phosphate. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient.

Sequence Features

Domain/signature hits from InterPro and related databases.

10 records
Show feature table
Start End DB Term Name
245 371 Pfam PF00004 ATPase family associated with various cellular activities (AAA)
245 371 InterPro IPR003959 ATPase, AAA-type, core
214 440 SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
214 440 InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
241 374 SMART SM00382 AAA_5
241 374 InterPro IPR003593 AAA+ ATPase domain
122 468 PANTHER PTHR42960 YCF46 PROTEIN
372 477 Gene3D G3DSA:1.10.8.60 -
210 370 Gene3D G3DSA:3.40.50.300 -
210 370 InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

Loading 3D structure...

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Structural evidence

0 + 2

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold AF_A0A0H3GWN5
AlphaFold full sequence Viewing
ColabFold KP13_32091
ColabFold full sequence Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
39 0.731
8 0.475
17 0.472
34 0.221

Pockets (P2RANK)

Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).

P2RANK Sticks Spheres Surfaces Score Probability Labels Zoom Positions
1 12.65 0.657
2 1.26 0.012

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

159 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
AF3 Q01853 84.0 Da LogP 0.88 TPSA 0.0 ✓ Ro5 ✓ Clean F[Al](F)F
AGS P55072 523.2 Da LogP -1.51 TPSA 262.1 3 viol. ✓ Clean c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)…
ANP P40327 506.2 Da LogP -2.06 TPSA 281.9 3 viol. ✓ Clean c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)…
AWD P55072 237.3 Da LogP 1.60 TPSA 35.6 ✓ Ro5 ✓ Clean CN1CCN(CC1)C(=O)Nc2ccc(cc2)F
BEF P25694 66.0 Da LogP 0.88 TPSA 0.0 ✓ Ro5 ✓ Clean [Be-](F)(F)F
EJQ P55072 222.3 Da LogP 1.86 TPSA 32.3 ✓ Ro5 ✓ Clean c1cc(ccc1NC(=O)CN2CCCC2)F
EJW P55072 175.2 Da LogP 1.08 TPSA 53.7 ✓ Ro5 ✓ Clean c1ccc(cc1)c2cc(on2)C[NH3+]
ELN P55072 194.6 Da LogP 2.19 TPSA 52.9 ✓ Ro5 ✓ Clean c1cc(ccc1NC(=O)CC#N)Cl
ELQ P55072 240.3 Da LogP 1.35 TPSA 23.6 ✓ Ro5 ✓ Clean CN1CCN(CC1)C(=O)c2ccc(c(c2)F)F

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.