Protein profile

KP13_32099

F-type conjugal transfer TraF-like protein

Genome: KpKP13

Gene: AHE41969.1 Structure source: AlphaFold + ColabFold UniProt A0A0H3H6D7
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Amino acids 346
Annotations 0
Features 15
PDB binders 0
Druggability 0.284

Overview

Basic information about this protein and its source genome.

Accession
KP13_32099
Assembly
Klebsiella pneumoniae subsp. pneumoniae Kp13, complete sequence
Gene
AHE41969.1
Status
annotated
Amino acids
346
Structure source
AlphaFold + ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Human identity (%)
0.0
Gut microbiome off-target
hit
Essential (DEG)
N
DEG identity (%)
0.0
Localization
Periplasmic
ColabFold pLDDT
83.24

Selected Druggability evidence

AlphaFold / UniProt model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.284
Structure A0A0H3H6D7
Pocket Pocket 5
P2Rank 0.013
Structure A0A0H3H6D7
Pocket Pocket 1
ColabFold model
FPocket 0.67 · Pocket 5
P2Rank 0.015 · Pocket 1
Core conservation Accessory gene
Roary accessory
CoreCruncher accessory
Gut microbiome 1 / 4744 genomes with a hit
Normalized 0

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

No GO or EC annotations are currently loaded for this protein.

Sequence Features

Domain/signature hits from InterPro and related databases.

15 records
Show feature table
Start End DB Term Name
13 32 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
52 88 MobiDBLite mobidb-lite consensus disorder prediction
28 32 Phobius SIGNAL_PEPTIDE_C_REGION C-terminal region of a signal peptide.
34 285 NCBIfam TIGR02740 TraF-like protein
34 285 InterPro IPR014111 Type IV conjugative transfer system protein TraF-like
47 276 Pfam PF13728 F plasmid transfer operon protein
47 276 InterPro IPR039555 F plasmid transfer operon protein
1 15 Phobius SIGNAL_PEPTIDE_N_REGION N-terminal region of a signal peptide.
1 32 SignalP_EUK SignalP-noTM SignalP-noTM
71 85 MobiDBLite mobidb-lite consensus disorder prediction
16 27 Phobius SIGNAL_PEPTIDE_H_REGION Hydrophobic region of a signal peptide.
52 70 MobiDBLite mobidb-lite consensus disorder prediction
33 346 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
1 32 SignalP_GRAM_POSITIVE SignalP-TM SignalP-TM
1 32 Phobius SIGNAL_PEPTIDE Signal peptide region

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

0 + 2

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold AF_A0A0H3H6D7
AlphaFold — — full sequence — Viewing
ColabFold KP13_32099
ColabFold — — full sequence — Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
5 0.284

Pockets (P2RANK)

Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).

P2RANK Sticks Spheres Surfaces Score Probability Labels Zoom Positions
1 0.69 0.001