Protein profile

KP13_03984

F-type conjugal transfer protein TraH

Genome: KpKP13

Gene: AHE47176.1 Structure source: ColabFold
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Amino acids 110
Annotations 0
Features 9
PDB binders 0
Druggability 0.697

Overview

Basic information about this protein and its source genome.

Accession
KP13_03984
Assembly
Klebsiella pneumoniae subsp. pneumoniae Kp13, complete sequence
Gene
AHE47176.1
Status
annotated
Amino acids
110
Structure source
ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Human identity (%)
0.0
Gut microbiome off-target
hit
Essential (DEG)
N
DEG identity (%)
0.0
Localization
Unknown
ColabFold pLDDT
59.8

Selected Druggability evidence

ColabFold / curated model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.697
Structure CB_KP13_03984
Pocket Pocket 2
P2Rank
Structure CB_KP13_03984
Pocket No pockets
ColabFold model
FPocket 0.697 · Pocket 2
Core conservation Accessory gene
Roary accessory
CoreCruncher accessory
Gut microbiome 2 / 4744 genomes with a hit
Normalized 0

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

No GO or EC annotations are currently loaded for this protein.

Sequence Features

Domain/signature hits from InterPro and related databases.

9 records
Show feature table
Start End DB Term Name
35 102 Pfam PF06122 Conjugative relaxosome accessory transposon protein
35 102 InterPro IPR010927 Type IV conjugative transfer system protein TraH
32 110 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
1 31 Phobius SIGNAL_PEPTIDE Signal peptide region
1 31 SignalP_GRAM_POSITIVE SignalP-TM SignalP-TM
1 31 SignalP_GRAM_NEGATIVE SignalP-noTM SignalP-noTM
25 31 Phobius SIGNAL_PEPTIDE_C_REGION C-terminal region of a signal peptide.
14 24 Phobius SIGNAL_PEPTIDE_H_REGION Hydrophobic region of a signal peptide.
1 13 Phobius SIGNAL_PEPTIDE_N_REGION N-terminal region of a signal peptide.

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
ColabFold KP13_03984
ColabFold — — full sequence — Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
2 0.697