Protein profile

KP13_03080

F-type conjugal transfer protein TraV

Genome: KpKP13

Gene: AHE47269.1 Structure source: ColabFold UniProt A0ACC7Q2W4
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Amino acids 245
Annotations 0
Features 15
PDB binders 0
Druggability 0.173

Overview

Basic information about this protein and its source genome.

Accession
KP13_03080
Assembly
Klebsiella pneumoniae subsp. pneumoniae Kp13, complete sequence
Gene
AHE47269.1
Status
annotated
Amino acids
245
Structure source
ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Human identity (%)
0.0
Gut microbiome off-target
No hit
Essential (DEG)
N
DEG identity (%)
0.0
Localization
Unknown
ColabFold pLDDT
59.47

Selected Druggability evidence

ColabFold / curated model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.173
Structure CB_KP13_03080
Pocket Pocket 3
P2Rank 0.111
Structure CB_KP13_03080
Pocket Pocket 1
ColabFold model
FPocket 0.173 · Pocket 3
P2Rank 0.111 · Pocket 1
Core conservation Accessory gene
Roary accessory
CoreCruncher accessory
Gut microbiome 0 / 4744 genomes with a hit
Normalized 0

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

No GO or EC annotations are currently loaded for this protein.

Sequence Features

Domain/signature hits from InterPro and related databases.

15 records
Show feature table
Start End DB Term Name
23 245 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
1 6 Phobius SIGNAL_PEPTIDE_N_REGION N-terminal region of a signal peptide.
56 83 MobiDBLite mobidb-lite consensus disorder prediction
18 22 Phobius SIGNAL_PEPTIDE_C_REGION C-terminal region of a signal peptide.
5 199 NCBIfam TIGR02747 type IV conjugative transfer system lipoprotein TraV
5 199 InterPro IPR014118 Type IV conjugative transfer system protein TraV
1 20 ProSiteProfiles PS51257 Prokaryotic membrane lipoprotein lipid attachment site profile.
221 241 MobiDBLite mobidb-lite consensus disorder prediction
26 199 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV)
26 199 InterPro IPR014118 Type IV conjugative transfer system protein TraV
1 26 SignalP_EUK SignalP-noTM SignalP-noTM
220 241 MobiDBLite mobidb-lite consensus disorder prediction
1 26 SignalP_GRAM_POSITIVE SignalP-TM SignalP-TM
7 17 Phobius SIGNAL_PEPTIDE_H_REGION Hydrophobic region of a signal peptide.
1 22 Phobius SIGNAL_PEPTIDE Signal peptide region

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

No pockets are loaded yet for the displayed ColabFold model KP13_03080 structure. Run experimental pocket backfill to show FPocket/P2Rank overlays on this structure.

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
ColabFold KP13_03080
ColabFold — — full sequence — Viewing