Protein profile

KP13_31590

Dihydrofolate reductase type 15

Genome: KpKP13

Gene: dhfrXV AHE47306.1 Structure source: AlphaFold + ColabFold UniProt Q9KJY6
Amino acids 157
Annotations 8
Features 17
PDB binders 24
Druggability 0.14

Overview

Basic information about this protein and its source genome.

Accession
KP13_31590
Gene
dhfrXV AHE47306.1
Status
annotated
Amino acids
157
Structure source
AlphaFold + ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Human identity (%)
0.0
Gut microbiome off-target
hit
Essential (DEG)
N
DEG identity (%)
0.0
Localization
Unknown
ColabFold pLDDT
96.92

Selected Druggability evidence

AlphaFold / UniProt model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.14
Structure Q9KJY6
Pocket Pocket 7
P2Rank 0.918
Structure Q9KJY6
Pocket Pocket 1
ColabFold model
FPocket 0.382 · Pocket 5
P2Rank 0.886 · Pocket 1
Core conservation Accessory gene
Roary accessory
CoreCruncher accessory
Gut microbiome 4 / 4744 genomes with a hit
Normalized 0.001

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

1 EC 7 GO

Enzyme Commission (EC)

1

Gene Ontology (GO)

7
  • GO:0050661 Binding to nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP+, or the reduced form, NADPH.
  • GO:0004146 Catalysis of the reaction: 5,6,7,8-tetrahydrofolate + NADP+ = 7,8-dihydrofolate + NADPH + H+.
  • GO:0046654 The chemical reactions and pathways resulting in the formation of tetrahydrofolate, 5,6,7,8-tetrahydrofolic acid, a folate derivative bearing additional hydrogens on the pterin group.
  • GO:0006545 The chemical reactions and pathways resulting in the formation of glycine, aminoethanoic acid.
  • GO:0046452 The chemical reactions and pathways involving dihydrofolate, the dihydroxylated derivative of folate.
  • GO:0046655 The chemical reactions and pathways involving folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines.
  • GO:0006730 The chemical reactions and pathways involving the transfer of one-carbon units in various oxidation states.

Sequence Features

Domain/signature hits from InterPro and related databases.

17 records
Show feature table
Start End DB Term Name
14 36 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature.
14 36 InterPro IPR017925 Dihydrofolate reductase conserved site
3 140 PANTHER PTHR48069 DIHYDROFOLATE REDUCTASE
3 140 InterPro IPR012259 Dihydrofolate reductase
1 157 Gene3D G3DSA:3.40.430.10 Dihydrofolate Reductase, subunit A
1 157 InterPro IPR024072 Dihydrofolate reductase-like domain superfamily
93 107 PRINTS PR00070 Dihydrofolate reductase signature
14 24 PRINTS PR00070 Dihydrofolate reductase signature
41 52 PRINTS PR00070 Dihydrofolate reductase signature
28 36 PRINTS PR00070 Dihydrofolate reductase signature
3 155 CDD cd00209 DHFR
3 155 InterPro IPR001796 Dihydrofolate reductase domain
3 155 Pfam PF00186 Dihydrofolate reductase
1 156 SUPERFAMILY SSF53597 Dihydrofolate reductase-like
1 156 InterPro IPR024072 Dihydrofolate reductase-like domain superfamily
2 156 ProSiteProfiles PS51330 Dihydrofolate reductase (DHFR) domain profile.
2 156 InterPro IPR001796 Dihydrofolate reductase domain

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

0 + 2

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold AF_Q9KJY6
AlphaFold full sequence Viewing
ColabFold KP13_31590
ColabFold full sequence Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (P2RANK)

Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).

P2RANK Sticks Spheres Surfaces Score Probability Labels Zoom Positions
1 24.84 0.901
2 1.46 0.02
3 1.13 0.008

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

174 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
2MX P0ABQ4 1031.2 Da LogP 2.34 TPSA 404.7 3 viol. ✓ Clean CN(Cc1cnc2c(n1)c(nc(n2)N)N)c3ccc(cc3)C(=O)N[C@@…
5N1 A4GRC7 387.4 Da LogP 3.15 TPSA 109.2 ✓ Ro5 ✓ Clean CCc1c(c(nc(n1)N)N)C#CC(C)c2cc(cc3c2OCO3)c4ccncc4
6DR A4GRC7 359.4 Da LogP 2.87 TPSA 99.9 ✓ Ro5 ✓ Clean CCc1c(c(nc(n1)N)N)C#CCc2cc(ccc2OC)c3ccncc3
6ME P0ABQ4 178.2 Da LogP 0.77 TPSA 77.8 ✓ Ro5 ✓ Clean C[C@H]1CCc2c(c(nc(n2)N)N)C1
7ME P0ABQ4 178.2 Da LogP 0.77 TPSA 77.8 ✓ Ro5 ✓ Clean C[C@H]1CCc2c(nc(nc2N)N)C1
817 P0ABQ4 276.3 Da LogP 2.36 TPSA 85.8 ✓ Ro5 ✓ Clean [H]/N=C(\N)/N/C(=N/[H])/SCc1cccc(c1)C(F)(F)F
8CV P0ABQ4 205.3 Da LogP 0.24 TPSA 97.8 ✓ Ro5 ✓ Clean [H]/N=C(/N)\N/C(=N/[H])/NCCc1ccccc1
8DM P0ABQ4 266.3 Da LogP 0.32 TPSA 129.7 ✓ Ro5 ✓ Clean c1cc(ccc1C(=O)N[C@@H](CCC(=O)O)C(=O)O)N
ATR P0ABQ4 507.2 Da LogP -1.63 TPSA 279.1 3 viol. ✓ Clean c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)…
BFR P0ABQ4 157.2 Da LogP -0.42 TPSA 100.3 ✓ Ro5 ✓ Clean [H]/N=C(\NCCCC)/N=C(N)N
C1A P0ABQ4 366.5 Da LogP 1.61 TPSA 171.5 1 viol. ✓ Clean [H]/N=C(/N/C(=N\[H])/SCc1c(cc(c(c1)C)CS/C(=N/[H…
DDF P0ABQ4 443.5 Da LogP 0.62 TPSA 187.5 1 viol. ✓ Clean c1cc(ccc1CC[C@@H]2CC3=C(NC2)NC(=NC3=O)N)C(=O)N[…
DZF P0ABQ4 440.4 Da LogP 0.56 TPSA 200.4 1 viol. ✓ Clean c1cc(ccc1C(=O)N[C@@H](CCC(=O)O)C(=O)O)NCc2cc3c(…
FFO P0ABQ4 473.4 Da LogP -0.73 TPSA 219.8 1 viol. ✓ Clean c1cc(ccc1C(=O)NC(CCC(=O)O)C(=O)O)NCC2CNC3=C(N2C…
FOL Q83AB2 441.4 Da LogP -0.04 TPSA 213.3 1 viol. ✓ Clean c1cc(ccc1C(=O)N[C@@H](CCC(=O)O)C(=O)O)NCc2cnc3c…
GLV A4GRC7 74.0 Da LogP -0.73 TPSA 54.4 ✓ Ro5 ✓ Clean C(=O)C(=O)O
JZM P0ABQ4 302.8 Da LogP 3.60 TPSA 77.8 ✓ Ro5 ✓ Clean c1cc2c(c(c1)Sc3ccc(cc3)Cl)c(nc(n2)N)N
LG3 P0ABQ4 110.1 Da LogP -0.36 TPSA 77.8 ✓ Ro5 ✓ Clean c1cnc(nc1N)N
MTX A0A3N4BLI0 454.4 Da LogP 0.27 TPSA 210.5 ✓ Ro5 ✓ Clean CN(Cc1cnc2c(n1)c(nc(n2)N)N)c3ccc(cc3)C(=O)N[C@@…
PQD P0ABQ4 304.4 Da LogP 2.38 TPSA 108.8 ✓ Ro5 ✓ Clean c1cc(cc(c1)N)Cn2ccc3c2ccc4c3c(nc(n4)N)N
Q24 P0ABQ4 160.2 Da LogP 0.79 TPSA 77.8 ✓ Ro5 ✓ Clean c1ccc2c(c1)c(nc(n2)N)N
TE P0ABQ4 129.6 Da LogP -0.92 TPSA 0.0 ✓ Ro5 ✓ Clean [TeH2]
THG P0ABQ4 445.4 Da LogP -0.28 TPSA 211.6 1 viol. ✓ Clean c1cc(ccc1C(=O)N[C@@H](CCC(=O)O)C(=O)O)NC[C@H]2C…
ZM4 P0ABQ4 399.5 Da LogP 3.43 TPSA 120.9 ✓ Ro5 ✓ Clean CCc1c(c(nc(n1)N)N)C#CC(C)c2cc(ccc2C)c3ccc(cc3)C…

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.